DRSC/TRiP Functional Genomics Resources

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Protein Alignment NaCP60E and Catsper2

DIOPT Version :10

Sequence 1:NP_001261172.1 Gene:NaCP60E / 37981 FlyBaseID:FBgn0085434 Length:2896 Species:Drosophila melanogaster
Sequence 2:NP_001012220.1 Gene:Catsper2 / 366174 RGDID:1307620 Length:584 Species:Rattus norvegicus


Alignment Length:316 Identity:74/316 - (23%)
Similarity:152/316 - (48%) Gaps:55/316 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1747 VVDTPAFEWFVLVLIFASSITLCFEDINLDKNKT----LKRVLYWINFSFCLIFVVEMILKWLAL 1807
            |:|:..|..|::.|||.::..|..|...::...|    ||..|...::...|.|:||::|.||| 
  Rat   102 VLDSSIFSNFIISLIFLNTFVLMVEIELMNSTNTSLWPLKLALEVTDWFILLSFIVEILLMWLA- 165

  Fly  1808 GFSKYFTSFWTILDFIIVFVSV---FSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRIVVN 1869
            .|..::.:.|::.||::..:|:   |.:||..:.:...|:.||..|.||.|:..:|:..:::::.
  Rat   166 SFFLFWKNAWSVFDFVVTMLSLLPEFVVLIGVSADSVWLQLLRVSRVLRSLKLFARFPQIKVILL 230

  Fly  1870 ALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCIEQNYTW- 1933
            ||:.|:.|:..:|::.|:|:.:|::.||.||           .|....|..|     :|.|..: 
  Rat   231 ALVRALKSMTFLLMLLLIFFYVFAVAGVYFF-----------KEYSRSTIEN-----LEYNMFFS 279

  Fly  1934 --INSKITFDHVGMGYLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYFVIFIVCGS 1996
              :||.:|          :..:.|.:.|..|:.|.       .:....:.:::.||.:::::.||
  Rat   280 DLLNSLVT----------VFILFTLDHWYAVLQDV-------WKVPEASRVFSSIYVILWLLLGS 327

  Fly  1997 FFTLNLFIGVIIDNFNMLKKKYEGGVLEMFLTESQKHYYTAMKKLGRKKPQKVIKR 2052
            ....|:.:.:::.||..::.:     |...:|..:..|...:.|      :::|:|
  Rat   328 IIFRNIIVAMMVTNFQNIRNE-----LHEEMTHLEVQYKADIFK------RRIIQR 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaCP60ENP_001261172.1 Ion_trans 125..371 CDD:459842
Ion_trans 687..902 CDD:459842
Ion_trans 1751..2019 CDD:459842 66/277 (24%)
Na_channel_gate 2009..2063 CDD:240441 8/44 (18%)
Ion_trans 2067..2320 CDD:459842
GPHH 2332..2378 CDD:465306
Catsper2NP_001012220.1 Ion_trans 105..348 CDD:459842 66/276 (24%)
PTZ00121 <351..>494 CDD:173412 5/28 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 376..460
ANAPC15 <422..456 CDD:464583
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 480..510
Blue background indicates that the domain is not in the aligned region.

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