| Sequence 1: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_722521.1 | Gene: | Cacna1h / 114862 | RGDID: | 68943 | Length: | 2359 | Species: | Rattus norvegicus |
| Alignment Length: | 2965 | Identity: | 636/2965 - (21%) |
|---|---|---|---|
| Similarity: | 1044/2965 - (35%) | Gaps: | 1043/2965 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 116 RRVCVYIATNQFFDYCVMATILFNCIFLAMTETVEEAE--------------YIFLAIYSIEMVI 166
Fly 167 KIIAKGFLLNKYTYLRNPWNWLDFVVITSG---YATIGMEVGNLAGLRTFRVLRALKTVSIMPGL 228
Fly 229 KTIINALLHSFRQLAEVMTLTIFCLMVFALFALQVYMGELRNKC------VRQ------VPTDWT 281
Fly 282 NVSHTDWQIWVNDTDNWLY------DEDELPVLC--------------GNLTGARHC----PFEY 322
Fly 323 VCLCVGENPNHGYTNFDNFMWSMLTTFQLITLDYWENVYNMVLATCGPMSVSFFTVVVFFGSFYL 387
Fly 388 INLMLAVVALSYEE----EAEITNEERKKDLLDHRDDSTFSFDPSVLN---------VKKLNKNN 439
Fly 440 -----------KKKIDSRKGVLLASYSKKKTRRKKTKGGK----------------------EGG 471
Fly 472 TNGNGNGSNGDDNK--SHSATPSPGPSPRHSATERPSALTM-----QAQKQYQQMEQQHKLA--- 526
Fly 527 ----KSGSGGSNNP-MAPT------------PKGRISFQDSGMGVKNPNML-YPSDY-KGQLIAN 572
Fly 573 S---GQPSSNSSGVN-------------------------------RESSQDDSGVVDDHEEQDT 603
Fly 604 TNDMGHVSTVELALSPREVRLIKCNGNIARIKNHNVYALHQEFSSEVVVIDDLPDRNCDRCVHWC 668
Fly 669 TDYESWLQFQNCLYKVVRDPLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTF 733
Fly 734 ECIVKLMALSKDFFLCG--------WNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQ 790
Fly 791 SWTTMKVLLSIIISTIGALGNLTLILVIVIYIFAVIGMQLFSKDYTPEKFDPDPVP-RWNFNDFF 854
Fly 855 HSFMMIFRILCGE-WIEPLWDCMRAEEEQGASTCFAIFLPTLVMGNFMVLNLFLALLLNSFNSE- 917
Fly 918 -ELKSKKEEVGEESKLARSIERVRDLIRKKRQERKDRKERKFAEKFQQIVLDAQQAHAQTLSHQA 981
Fly 982 AVGLERGDKPGVLAETKFHRLSYQESMNRPVSGSDFGFQIPLHDGLHTIVDGLEYDDTGDLPEQI 1046
Fly 1047 QLQAHPLP-PTSDSMPPTYESAMMATTGGSFSSVNGNGTCQNLTPFVQAERRLQHQISSGVSTQQ 1110
Fly 1111 YDSREEATYTESIELLGQYNSTDTDPYANDQRSGCGSFNRGDSLQDNSSRRYGSEEHDEAFLKYQ 1175
Fly 1176 KSLLTRSPSYRKSLDRLSQSSGQSQRSLLKSEEAEMRRHSSGQSLNSMSIEQDELLSQQGNLREE 1240
Fly 1241 LLNCDQKELFQFLQEEEELQKGTKLRRISNVMRSRRPSSQMGQPENETMVEHSEFDNIIQSFEKE 1305
Fly 1306 LEEIKRSTTSLERKLSNLSEPSPAADEATKAIMEHIAIITGASERSAADEVVLPLNPYDSYDLSS 1370
Fly 1371 VPRRSQSVSAAAQRQSVKLKRRSLEKQRKIDEDFSISNEIRKICDQIHAPFVAMEAMAVAATSAS 1435
Fly 1436 QAQPNQSPFLRRKVDPFTVQFDRFKRLSLIERVEEVPEEEKPISTLRIESEKMPRKFLHGPDQLR 1500
Fly 1501 LDSLSLKSTNSYENLLIQKQKLGMATPPAVPATPPTSLKSSIEPPTLAQISSLKTTPPLAALTEH 1565
Fly 1566 QQHFHATSIQAAPTPAHTHAHSQAHAHSMAGQRRRMEHPQSTLDKAASFQSARTESHSSGAADAS 1630
Fly 1631 SALALAMAQKTEQSQSTAPDATQKPSAFTRLTEKPWHCLVSYVDDLTVGGRRNSQGAYNDPMTFP 1695
Fly 1696 SYGATKAAKVPDDCFPQKCYDHFYFRCPWFMSCMDTQSAKHWTRVRTAVLTVVDTPAFEWFVLVL 1760
Fly 1761 IFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVEMILKWLALGF----SKYFTSFWTILD 1821
Fly 1822 FIIVFVSVFSLLIE-----ENENLKVLRSLRTLRALRPLRAISRWQGMRIVVNALMYAIPSIFNV 1881
Fly 1882 LLVCLVFWLIFSIMGVQFFGGKFFKCVNEMGELLPITEVNDKWDCIEQNYTWINSKITFDHVGMG 1946
Fly 1947 YLALLQVATFEGWMEVMADAVDARGVDLQPQREANLYAYIYFVIFIVCGSFFTLNLFIGVIIDNF 2011
Fly 2012 NMLKKKYEGGVLEMFLTESQKHYYTAMKKLGRKKPQKVIKRP----INHFLAMFYDLSNSRRFEI 2072
Fly 2073 AIFVLIFLNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAIVKIVGLRY-HYFTVPWNVFDF 2136
Fly 2137 LLVLASIFGILMEDIMID--LPISPTLLRVVRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFN 2199
Fly 2200 IGALLGLITFIYAILGMSLFGNVKLQ-----GALDDMVNFQTFGRSMQLLFRLMTSAGWN----D 2255
Fly 2256 VLESLMIQPPDCDPFIHGHTNGNCGHPLLAITYFTSFIIISYMIVINMYIAIILENFNQAHQEEE 2320
Fly 2321 IGIVEDDLEMFYIRWSKYDPHATQFIHFSQLSDFIASLDPPLGISKPNNVALVSFNLPISKGNKI 2385
Fly 2386 HCLDILHALVKHVLGHVEETDNFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKRQEKAAKTIQT 2450
Fly 2451 GWKEYLRRKREKERSNSGDSATQTSSPGGWQSKLSALNFFHLQVSRRGTACSSRASSRKSSRASD 2515
Fly 2516 ASDLSELAGPWLNLPLMLVSGADEVVKDIKQQNDELGKRGSIFVEAPRASRRRSFYNFFLRHQDA 2580
Fly 2581 VDDSLTSPSVHRK---TAMNNTTNTTSNSASTSGTASSTATAPATGCGPAATSASDSDRHQAVGG 2642
Fly 2643 GSAPSRKRASSF----IRKKPPLERGLSAQSALRVNKNAFVSEASAPEVIVTRPSPEQQTHPHSL 2703
Fly 2704 SLRPDNATLVHVLVHRESEEYKEEDESSPSVSGNGNGFGVGLDMLSKQPPPQIRITTGSVESSMD 2768
Fly 2769 TCAMPTVQIMVDSPKDPPRGDFSSAPIDDVGAPIDV-NVQGDTSQVFYDYNP------------- 2819
Fly 2820 ----EKATDDQGNGQDETAQFESLPDRQRXPPVNTPL-RD 2854 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| NaCP60E | NP_001261172.1 | Ion_trans | 125..371 | CDD:459842 | 84/298 (28%) |
| Ion_trans | 687..902 | CDD:459842 | 71/224 (32%) | ||
| Ion_trans | 1751..2019 | CDD:459842 | 102/276 (37%) | ||
| Na_channel_gate | 2009..2063 | CDD:240441 | 10/57 (18%) | ||
| Ion_trans | 2067..2320 | CDD:459842 | 90/264 (34%) | ||
| GPHH | 2332..2378 | CDD:465306 | 5/45 (11%) | ||
| Cacna1h | NP_722521.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..63 | ||
| I | 87..422 | 96/335 (29%) | |||
| Ion_trans | 99..430 | CDD:459842 | 95/334 (28%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 490..573 | 17/87 (20%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 620..656 | 8/35 (23%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 737..769 | 6/39 (15%) | |||
| II | 776..1015 | 79/249 (32%) | |||
| Ion_trans | 789..1023 | CDD:459842 | 77/244 (32%) | ||
| PHA03307 | 1058..>1219 | CDD:223039 | 58/501 (12%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1061..1197 | 48/446 (11%) | |||
| III | 1292..1569 | 103/286 (36%) | |||
| Ion_trans | 1304..1576 | CDD:459842 | 102/276 (37%) | ||
| IV | 1607..1868 | 91/270 (34%) | |||
| Ion_trans | 1621..1852 | CDD:459842 | 87/240 (36%) | ||
| PHA03307 | 1878..>2259 | CDD:223039 | 94/554 (17%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1891..1913 | 7/56 (13%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1974..2003 | 11/62 (18%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2016..2258 | 58/295 (20%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2335..2359 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||