DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp1 and MMP19

DIOPT Version :10

Sequence 1:NP_726473.2 Gene:Mmp1 / 37949 FlyBaseID:FBgn0035049 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_002420.1 Gene:MMP19 / 4327 HGNCID:7165 Length:508 Species:Homo sapiens


Alignment Length:547 Identity:200/547 - (36%)
Similarity:275/547 - (50%) Gaps:78/547 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NCQSSVFIVVGTLF------SIMAAAQSAPVSTTTQAEIYLSQFGYL--PASARN---PASSGLH 56
            |||.   :.:|.|.      .::..|:.|||.       ||||:|||  |....|   |...   
Human     2 NCQQ---LWLGFLLPMTVSGRVLGLAEVAPVD-------YLSQYGYLQKPLEGSNNFKPEDI--- 53

  Fly    57 DQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVRDRVGTGDSRSKRYALQGSRWRVKNL 121
                 ..|:..||..:.|.::|:||..|...|..||||:.|..   :.::.:|.|.| |||.|:|
Human    54 -----TEALRAFQEASELPVSGQLDDATRARMRQPRCGLEDPF---NQKTLKYLLLG-RWRKKHL 109

  Fly   122 TYKISKYPKRLKRVDVDAEIGRAFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGD-----GDAF 181
            |::|...|..|......|.:.:||..||....|||....:|...|.:.|    ||.     .:.|
Human   110 TFRILNLPSTLPPHTARAALRQAFQDWSNVAPLTFQEVQAGAADIRLSF----HGRQSSYCSNTF 170

  Fly   182 DGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFY 246
            ||.|..||||..|.. |..|||:.|.||.|:.||.||..:||||.||:|||.||..|.|||||.|
Human   171 DGPGRVLAHADIPEL-GSVHFDEDEFWTEGTYRGVNLRIIAAHEVGHALGLGHSRYSQALMAPVY 234

  Fly   247 RGFEPVFKLDEDDKAAIQSLYGRKTNQLRPTNVYPATTQRPYSPPKVPLDDSICKD---SKVDTL 308
            .|:.|.|||..||.|.||:|||:|:..:|...  ...|:.|..|| ||.:.|...|   |::|.:
Human   235 EGYRPHFKLHPDDVAGIQALYGKKSPVIRDEE--EEETELPTVPP-VPTEPSPMPDPCSSELDAM 296

  Fly   309 FNSAQGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAA-FTYKNGKTYFFKGTQYWR 372
            ....:|:|||||||  |..|......|....:|..|.|||||:||| ::.:....:||||.:.||
Human   297 MLGPRGKTYAFKGD--YVWTVSDSGPGPLFRVSALWEGLPGNLDAAVYSPRTQWIHFFKGDKVWR 359

  Fly   373 YQGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPIS 437
            |...:|...:||:::.    :..:||||:.|..|.|::.||||.:|::|...|... :||||||.
Human   360 YINFKMSPGFPKKLNR----VEPNLDAALYWPLNQKVFLFKGSGYWQWDELARTDF-SSYPKPIK 419

  Fly   438 N-WEGVPNNLDAALKYTNGYTYFFKGDKYYRFHDARFAVDSATPPFPRPTAHWWFGCK------- 494
            . :.||||...||:.:.:|..|||||..|:|.:. :..|:..   :||..:|.|..|:       
Human   420 GLFTGVPNQPSAAMSWQDGRVYFFKGKVYWRLNQ-QLRVEKG---YPRNISHNWMHCRPRTIDTT 480

  Fly   495 -----NTPSSTG----NIVEGSDNEFE 512
                 .|||.||    ..:..::..||
Human   481 PSGGNTTPSGTGITLDTTLSATETTFE 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp1NP_726473.2 PG_binding_1 32..88 CDD:460223 18/60 (30%)
Peptidase_M10 115..268 CDD:425668 72/157 (46%)
HX 298..493 CDD:238046 74/199 (37%)
MMP19NP_002420.1 PG_binding_1 31..80 CDD:460223 18/56 (32%)
Cysteine switch. /evidence=ECO:0000250 83..90 4/6 (67%)
ZnMc_MMP 103..256 CDD:239805 72/157 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..288 8/28 (29%)
HX 286..472 CDD:238046 73/196 (37%)
Hemopexin 1 286..333 16/48 (33%)
Hemopexin 2 334..380 16/49 (33%)
Hemopexin 3 381..425 19/44 (43%)
Hemopexin 4 426..472 17/49 (35%)

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