DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp1 and MMP11

DIOPT Version :10

Sequence 1:NP_726473.2 Gene:Mmp1 / 37949 FlyBaseID:FBgn0035049 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_005931.2 Gene:MMP11 / 4320 HGNCID:7157 Length:488 Species:Homo sapiens


Alignment Length:488 Identity:184/488 - (37%)
Similarity:244/488 - (50%) Gaps:60/488 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LPASARNPASSGLHDQR----TWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVRDRVG--T 101
            |.|.|..|.:..||.:|    .|.:|:.  .|.|....|.|.......|.. |||||.|...  :
Human    29 LLARALPPDAHHLHAERRGPQPWHAALP--SSPAPAPATQEAPRPASSLRP-PRCGVPDPSDGLS 90

  Fly   102 GDSRSKRYALQGSRWRVKNLTYKISKYPKRLKRVDVDAEIGRAFAVWSEDTDLTFTRKTSGPVHI 166
            ..:|.||:.|.|.||...:|||:|.::|.:|.:..|...:..|..|||:.|.||||....|...|
Human    91 ARNRQKRFVLSGGRWEKTDLTYRILRFPWQLVQEQVRQTMAEALKVWSDVTPLTFTEVHEGRADI 155

  Fly   167 EIKFVESEHGDGDAFDGQGGTLAHAFFPVF--GGDAHFDDAELWTIGSPRGTNLFQVAAHEFGHS 229
            .|.|....|||...|||.||.|||||||..  .||.|||..|.||||..:||:|.|||||||||.
Human   156 MIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGHV 220

  Fly   230 LGLSHSDQSSALMAPFYRGFEPVFKLDEDDKAAIQSLYGR------------------KTNQLRP 276
            |||.|:..:.|||:.||. |.....|..||...:|.|||:                  .||::.|
Human   221 LGLQHTTAAKALMSAFYT-FRYPLSLSPDDCRGVQHLYGQPWPTVTSRTPALGPQAGIDTNEIAP 284

  Fly   277 TNVYPATTQRPYSPPKVPLDDSICKDS--KVDTLFNSAQGETYAFKGDKYYKLTTDSVEEGYPQL 339
            .        .|.:||      ..|:.|  .|.|:    :||.:.||....::|....::.|||.|
Human   285 L--------EPDAPP------DACEASFDAVSTI----RGELFFFKAGFVWRLRGGQLQPGYPAL 331

  Fly   340 ISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRYQGRQMDGVYPKEISE-GFTGIPDHLDAAMVW 403
            .|:.|.|||..:||||....|..:||:|.|||.|.| :...:.|..::| |....|.|  ||:||
Human   332 ASRHWQGLPSPVDAAFEDAQGHIWFFQGAQYWVYDG-EKPVLGPAPLTELGLVRFPVH--AALVW 393

  Fly   404 G-GNGKIYFFKGSKFWRFDPAKRPPVKASYPKPISNWEGVPNNLDAALKYTNGYTYFFKGDKYYR 467
            | ...|||||:|..:|||.|:.| .|.:..|:..::|.|||:.:|||.:..:||.||.:|..|::
Human   394 GPEKNKIYFFRGRDYWRFHPSTR-RVDSPVPRRATDWRGVPSEIDAAFQDADGYAYFLRGRLYWK 457

  Fly   468 FHDARFAVDSATPPFPRPTAHWWFGCKNTPSST 500
            |...:.   .|...|||.....:|||.. |::|
Human   458 FDPVKV---KALEGFPRLVGPDFFGCAE-PANT 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp1NP_726473.2 PG_binding_1 32..88 CDD:460223 13/48 (27%)
Peptidase_M10 115..268 CDD:425668 74/154 (48%)
HX 298..493 CDD:238046 73/198 (37%)
MMP11NP_005931.2 PRK12323 <2..>86 CDD:481241 20/59 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..93 16/54 (30%)
Cysteine switch. /evidence=ECO:0000250 78..85 5/6 (83%)
Peptidase_M10 104..258 CDD:425668 74/154 (48%)
HX 291..480 CDD:238046 74/205 (36%)
Hemopexin 1 291..339 16/57 (28%)
Hemopexin 2 340..382 16/42 (38%)
Hemopexin 3 384..432 21/50 (42%)
Hemopexin 4 433..480 16/49 (33%)

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