DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp1 and Hpx

DIOPT Version :10

Sequence 1:NP_726473.2 Gene:Mmp1 / 37949 FlyBaseID:FBgn0035049 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_059067.2 Gene:Hpx / 15458 MGIID:105112 Length:460 Species:Mus musculus


Alignment Length:250 Identity:62/250 - (24%)
Similarity:98/250 - (39%) Gaps:70/250 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 PPKVPLD-----------------------------DSICK-DSKVDTLFNSAQGETYAFKGDKY 324
            ||:.|||                             .|.|. |..:..|.:..:|.||||.|..|
Mouse   216 PPRYPLDARDYFVSCPGRGHGRPRNGTAHGNSTHPMHSRCSPDPGLTALLSDHRGATYAFTGSHY 280

  Fly   325 YKLTTDSVEEGYPQL-ISKGWPGLPGNIDAAFTYKNGKTYFFKGTQYWRY---QGRQMDGVYPKE 385
            ::|  ||..:|:... |:..||..|..:||||:: :.|.|..:|||.:.:   .|..:...|||.
Mouse   281 WRL--DSSRDGWHSWPIAHHWPQGPSTVDAAFSW-DDKVYLIQGTQVYVFLTKGGNNLVSGYPKR 342

  Fly   386 ISEGFTGIP----DHLDAAMVWGGNGKIYFFKGSKFWRFD---PAKRPPVKASYPKPISNWEGVP 443
            :.:.....|    :.:|||....|:.::|...|.:.|..|   .|:....:.|:|.         
Mouse   343 LEKELGSPPGISLETIDAAFSCPGSSRLYVSSGRRLWWLDLKSGAQATWTEVSWPH--------- 398

  Fly   444 NNLDAALKY----------TNGYT-YFFKGDKYYRFHDARFAVD--SATPPFPRP 485
            ..:|.||..          :||.: ||..|...|.:.    ::|  :|....|:|
Mouse   399 EKVDGALCLDKSLGPNTCSSNGSSLYFIHGPNLYCYS----SIDKLNAAKSLPQP 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp1NP_726473.2 PG_binding_1 32..88 CDD:460223
Peptidase_M10 115..268 CDD:425668
HX 298..493 CDD:238046 56/212 (26%)
HpxNP_059067.2 HX 47..230 CDD:238046 5/13 (38%)
Hemopexin 1 53..93
Hemopexin 2 94..138
Hemopexin 3 139..183
Hemopexin 4 184..230 5/13 (38%)
HX 253..458 CDD:238046 56/212 (26%)
Hemopexin 5 257..302 16/46 (35%)
Hemopexin 6 303..350 14/47 (30%)
Hemopexin 7 355..394 9/38 (24%)
Hemopexin 8 398..448 11/62 (18%)
Blue background indicates that the domain is not in the aligned region.

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