Protein Alignment Mmp1 and mmp23ba

DIOPT Version :10

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: XP_009302611.1
• Gene: mmp23ba / 101882601
• ZFINID: ZDB-GENE-030131-9548
• Length: 371
• Species: Danio rerio
• Alignment Length: 294
• Identity: 88/294 - (29%)
• Similarity: 122/294 - (41%)
• Gaps: 73/294 - (24%)

  Fly   104 SRSKRYAL--QGSRWRVKNLTYKISKYPKR-LKRVDVDAEIGRAFAVWSEDTDLTFTRKTSG-PV 164
            ||:|||.|  :..:|....:|||:..:|:. |...|....|.:||::||:.:..:|....|. ..
Zfish    55 SRNKRYTLTPEKLKWDNFKMTYKLLSFPRNLLNATDTRRGISKAFSMWSDVSPFSFREVPSDQEA 119

  Fly   165 HIEIKFVESEHGD------GDAFDGQGGTLAHAFFPVFGGDAHFDDAELWTIGSPRG-------- 215
            .|:|.|....|.|      ...|||..|.|||||||. .|:.||||.|.|.:|:.|.
Zfish   120 DIKIGFYSVNHTDCLHSHLHHCFDGITGELAHAFFPQ-TGEIHFDDDEYWILGNMRFSWNKGVWL 183

  Fly   216 TNLFQVAAHEFGHSLGLSHSDQSSALM--APFYRGFEPVFKLDEDDKAAIQSLYG---------- 268
            |:|..|||||.||.|||.||....|||  .....|.:   .:.:|:...:..|||
Zfish   184 TDLVHVAAHEIGHVLGLMHSQNPKALMHLNATLTGRK---LITQDEVWGLHRLYGCLDRFFICPS 245

  Fly   269 ----------RKTNQLR-PTNV-----YPATTQRP-YSPPKVPLDDSICKDSKVDTLFNSAQGET 316
                      ||..|.. |::.     :|..|.|| .:||:.       |...|      .:|:.
Zfish   246 WARKGYCDSKRKLMQKHCPSSCDFCYEFPFPTARPTTAPPRT-------KHKFV------VEGKN 297

  Fly   317 YAF---------KGDKYYKLTTDSVEEGYPQLIS 341
            ..|         ||..|:....:.:|..:|..||
Zfish   298 LTFRCGKKIAAKKGKIYWYKDGELLEFSHPGYIS 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:460223
		Peptidase_M10	115..268	CDD:425668	59/170 (35%)
		HX	298..493	CDD:238046	11/53 (21%)
mmp23ba	XP_009302611.1	ZnMc_MMP	68..235	CDD:239805	59/170 (35%)
		ShKT	236..270	CDD:214586	4/33 (12%)
		Ig	276..369	CDD:472250	16/69 (23%)
		Ig strand B	298..302	CDD:409353	1/3 (33%)
		Ig strand E	328..332	CDD:409353	2/4 (50%)
		Ig strand F	348..353	CDD:409353
		Ig strand G	362..365	CDD:409353