Protein Alignment Mmp1 and mmp20b

DIOPT Version :10

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: XP_009290029.1
• Gene: mmp20b / 100537445
• ZFINID: ZDB-GENE-100603-3
• Length: 490
• Species: Danio rerio
• Alignment Length: 519
• Identity: 167/519 - (32%)
• Similarity: 241/519 - (46%)
• Gaps: 63/519 - (12%)

  Fly     4 CQSSVFIVVGTLFSI-MAAAQSAPVSTTTQAE-------IYLSQFGYLPASARNPASSGLHDQRT 60
            |....|.:.|..:|: :.......|..|..|:       .||.||....|.:   |......:.:
Zfish     6 CLVCAFDLFGQHYSLPLPLGDDGMVHPTKPAQNDLSLATKYLQQFYSFQADS---AGRKRRSRPS 67

  Fly    61 WVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVRDRVGTGDSRSKRYALQGSRWRVKNLTYKI 125
            :.|.::..|.|.|||.||.|:|:|:.:|..|||||.|   ..|...:|    |:||:...:||.:
Zfish    68 FSSKLKNMQGFFGLNGTGTLNADTLAVMRTPRCGVSD---VEDYSHRR----GNRWKKNIITYGV 125

  Fly   126 SKYPKRLKRVDVDAEIGRAFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAH 190
            .:|...|....||..|..|..||::.:.|||.|..|....|.::||..||||...|||..|||||
Zfish   126 GRYTNDLPVNAVDDLISSALDVWAKASPLTFLRSYSHQADIMVEFVGKEHGDFFPFDGPDGTLAH 190

  Fly   191 AFFP--VFGGDAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPVF 253
            ||.|  ..|||.|||:||:||.|. .|.||:.||||||||:|||.||....::|.|.|:..:...
Zfish   191 AFGPGEGIGGDVHFDEAEVWTAGY-NGFNLYVVAAHEFGHALGLKHSQLPESVMYPTYKRRKTHN 254

  Fly   254 KLDEDDKAAIQSLYGRKTNQLRPTNVYPATTQRPYSPPKVP----------LDDSICKDSKVDTL 308
            .|..:|...|.:|||.:..  ||   || :::..:|.|..|          ..|:.....|.|.:
Zfish   255 LLSSEDIININTLYGPRDK--RP---YP-SSRFSWSNPSTPWYSGSYFPVSFKDTCNPHLKFDAV 313

  Fly   309 FNSAQGETYAFKGDKYYKLTTD---SVEEGYPQLISKGWPGLPGNIDAAFTYKNGKT-YFFKGTQ 369
              :..|:...|..|.|..:..:   .::|| |  ||...|.:..:||||:......| |.|.||.
Zfish   314 --TTVGDAIFFFRDNYMWIKHNDQKDIKEG-P--ISNFMPKIDCHIDAAYWVPQRSTAYLFNGTT 373

  Fly   370 YWRYQGRQMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPK 434
            :|..:|.|:.|......|.||......:|||:.........||...::||::...: .:..|.|:
Zfish   374 FWTVKGSQVKGRAKNISSLGFPSWVQQVDAAVHIHKTVHTLFFTQHQYWRYNEHNK-NMTDSIPR 437

  Fly   435 PIS-NWEGVPNNLDAALKYTNGYTYFFKGDKYYRFHDAR----FAVDSATPPFPRPTAHWWFGC 493
            .|| ::..:...:.||: |.:||.:||.|...|:: |.:    ...|..|.         |.||
Zfish   438 NISDDFPEISGPISAAI-YKDGYLHFFIGSDVYKY-DIKQKEIIGTDKTTS---------WLGC 490

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:460223	18/62 (29%)
		Peptidase_M10	115..268	CDD:425668	69/154 (45%)
		HX	298..493	CDD:238046	52/203 (26%)
mmp20b	XP_009290029.1	PG_binding_1	45..95	CDD:460223	17/52 (33%)
		ZnMc_MMP	115..269	CDD:239805	69/154 (45%)
		HX	304..490	CDD:238046	52/202 (26%)