Protein Alignment Mmp1 and mmp13l

DIOPT Version :10

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: XP_002934971.2
• Gene: mmp13l / 100490019
• XenbaseID: XB-GENE-481559
• Length: 472
• Species: Xenopus tropicalis
• Alignment Length: 478
• Identity: 170/478 - (35%)
• Similarity: 241/478 - (50%)
• Gaps: 51/478 - (10%)

  Fly    14 TLFSIM------AAAQSAPV-----STTTQAEIYLSQ--FGYLPASARNPASSGLHDQRTWVSAI 65
            :|.|::      |...||||     |..|..::.|::  ...|.:|:.|.|  |:...|. |.:|
 Frog     4 SLLSVLVLSLSFAYCLSAPVPQDEDSEMTPGDLQLAEHYLNRLYSSSSNLA--GMLRMRN-VKSI 65

  Fly    66 E----EFQSFAGLNITGELDAETMKLMSLPRCGVRDRVGTGDSRSKRYALQGSRWRVKNLTYKIS 126
            |    |.|||.||.:||:|:.:|:.:|..|||||.| :|..:...::.     :|...||||:|.
 Frog    66 ETKLKEMQSFFGLEVTGKLNEDTLDIMKQPRCGVPD-IGQYNFFPRKL-----KWPRNNLTYRIV 124

  Fly   127 KYPKRLKRVDVDAEIGRAFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGDGDAFDGQGGTLAHA 191
            .|...|...:||..|.:|..|||:.|.|.|||..:|...|.:.|.:.||||...|||..|.||||
 Frog   125 NYTPDLSTSEVDRAIKKALKVWSDVTPLNFTRLRTGTADIMVSFGKKEHGDYYPFDGPDGLLAHA 189

  Fly   192 FFP--VFGGDAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFE-PVF 253
            |.|  ..|||.||||.|:::..: :|.|||.||||||||:|||.||....:||.|.|...| ..|
 Frog   190 FPPGEKIGGDTHFDDDEMFSTDN-KGYNLFVVAAHEFGHALGLDHSRDPGSLMFPVYTYTETSQF 253

  Fly   254 KLDEDDKAAIQSLYGRKTNQLRPTNVYPATTQRPYSPPKVPLDDSICKDSKVDTLFNSAQGETYA 318
            .|.:||...||:|||.......|.  :|.|.::  ..|::.:|           .....:||...
 Frog   254 LLPDDDVQGIQALYGPGNRDPHPK--HPKTPEK--CDPELSID-----------AITELRGEKMI 303

  Fly   319 FKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNIDAAFTY-KNGKTYFFKGTQYWRYQGRQMDGVY 382
            || |:::......:.:....||...||.||..||||:.: .....|.|:|.::|...|..:...|
 Frog   304 FK-DRFFWRVHPQMTDAELVLIKSFWPELPNKIDAAYEHAAKDVIYIFRGKKFWALNGYDIVEDY 367

  Fly   383 PKEISE-GFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPIS-NWEGVPNN 445
            ||::.| ||......:|||:.....||..||.|..:|.|:...|...| .:|:.|| ::.|:...
 Frog   368 PKKLHELGFPKTLKAIDAAVYNKAIGKTLFFAGDSYWSFNEETRTMDK-GFPRLISEDFPGIGEK 431

  Fly   446 LDAALKYTNGYTYFFKGDKYYRF 468
            :|||.: .|||.|||.|...:.:
 Frog   432 VDAAYQ-RNGYIYFFSGALQFEY 453

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:460223	20/61 (33%)
		Peptidase_M10	115..268	CDD:425668	74/155 (48%)
		HX	298..493	CDD:238046	52/174 (30%)
mmp13l	XP_002934971.2	PG_binding_1	35..92	CDD:460223	20/59 (34%)
		Peptidase_M10	113..268	CDD:425668	74/155 (48%)
		HX	282..471	CDD:238046	54/188 (29%)