Protein Alignment Mmp1 and mmp28

DIOPT Version :10

• Sequence 1: NP_726473.2
• Gene: Mmp1 / 37949
• FlyBaseID: FBgn0035049
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: XP_073780390.1
• Gene: mmp28 / 100005670
• ZFINID: ZDB-GENE-100226-1
• Length: 502
• Species: Danio rerio
• Alignment Length: 521
• Identity: 180/521 - (34%)
• Similarity: 264/521 - (50%)
• Gaps: 63/521 - (12%)

  Fly    17 SIMAAAQSAPVSTTTQAEIYLSQFGYLPASARNPASSGLHDQRTW-----VSAIEEFQSFAGLNI 76
            :::|.:.|:|:|:..|.  :|.|:|||           ..|..|:     .:||.|||..:.|.:
Zfish     8 ALLATSCSSPISSPAQG--FLEQYGYL-----------YKDNETYRTAEVKTAIREFQWLSWLPV 59

  Fly    77 TGELDAETMKLMSLPRCGVRDRVGTGDS-----------------RSKRYALQGSRWRVKNLTYK 124
            ||.|||.|::.|:.|||||.| .|:.|:                 |.|||...|.:|:.|.|:|:
Zfish    60 TGHLDAATLEKMASPRCGVTD-AGSIDAWQDRINGIFTGRHGQHLRKKRYTQLGEKWQKKQLSYR 123

  Fly   125 ISKYPKRLKRVDVDAEIGRAFAVWSEDTDLTFTRKTSGPVHIEIKFVESEHGD--GDAFDGQGGT 187
            |..:|:.|....|...:..||.:||..:.|.|.....||..|.:.|.:.||.|  |:||||.||.
Zfish   124 ILNWPRSLSTSQVHLAVSAAFQLWSNASGLQFLELHQGPADIRLAFYDGEHNDGAGNAFDGPGGA 188

  Fly   188 LAHAFFPVFGGDAHFDDAELWTIGSPRGTNLFQVAAHEFGHSLGLSHSDQSSALMAPFYRGFEPV 252
            ||||||| |.|:||||.:|.||:...:|.|||.|.|||.||:|||.||....|||:|:|:.....
Zfish   189 LAHAFFP-FRGEAHFDMSERWTLSGYKGHNLFLVTAHEIGHTLGLVHSPVRHALMSPYYKKISSN 252

  Fly   253 FKLDEDDKAAIQSLYGRKTNQLRPTNVYPAT--TQRPYSPPKVPLDDSICKD---SKVDTLFNSA 312
            ..|..||..|:|.|||:.........|..|.  |.:.:...:.|.:.|:..:   ...|.:....
Zfish   253 AVLSWDDITAVQQLYGKPPGDTVQQLVGRALRWTMQDWQISQDPRESSLTPNYCHGFFDAITTDE 317

  Fly   313 QGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPGNID-AAFTYKNGKTYFFKGTQYWRYQGR 376
            .|....|:|.:::.::..||.:  |.|:...||.|...|: |||...:.|.|||||.:.|||.|.
Zfish   318 NGAVLVFQGYRFWSVSNGSVSD--PCLLQTRWPQLSVTIEAAAFNPLDRKLYFFKGRRMWRYSGS 380

  Fly   377 QMDGVYPKEISEGFTGIPDHLDAAMVWGGNGKIYFFKGSKFWRFDPAKRPPVKASYPKPISNWEG 441
            .:|..:||..|.  .|:|.|:|.|..:...|::..||||::...:| :...::..||:|:.:|:|
Zfish   381 NLDPGFPKRSSA--LGLPKHVDCAFFYQPLGQLVLFKGSRYLVLNP-RSLSMELYYPRPLRDWKG 442

  Fly   442 VPNNLDAALKYTNGYTYFFKGDKYYRFHDARFAVDSATPPFPRPTAHW-----WFGCKNTPSSTG 501
            ||..::.||...:|..||||..:|:|....:..:.:|        ..|     |.||:.|||...
Zfish   443 VPREVNGALTRPDGMLYFFKEQQYWRLDIGKLRITAA--------GRWADSLQWIGCQKTPSLLD 499

  Fly   502 N 502
            |
Zfish   500 N 500

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mmp1	NP_726473.2	PG_binding_1	32..88	CDD:460223	20/60 (33%)
		Peptidase_M10	115..268	CDD:425668	70/154 (45%)
		HX	298..493	CDD:238046	60/203 (30%)
mmp28	XP_073780390.1	None