DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4681 and tex9

DIOPT Version :9

Sequence 1:NP_611937.2 Gene:CG4681 / 37928 FlyBaseID:FBgn0069913 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_002940302.3 Gene:tex9 / 100379774 XenbaseID:XB-GENE-994234 Length:437 Species:Xenopus tropicalis


Alignment Length:444 Identity:108/444 - (24%)
Similarity:177/444 - (39%) Gaps:134/444 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LRKK--GAPTACTKAAP-------KASPGRETVPT---ARSPMPDMSLLTKSKPAAG-PTSPTPR 111
            |||:  |.|:....:.|       .|.|.:...||   ::....:.:|..|:|.|.| |...||:
 Frog     7 LRKQRSGQPSQLLPSTPGLQGTEANALPQKNKNPTCSKSKQSKLESTLAKKTKCANGQPLPMTPK 71

  Fly   112 NLSKFSTFTK---------DVSSKTATYVKYRNPNFSE------SPSLDELLRNDADEAN---RK 158
            ..:|.|...|         ::.:|||..|:.......|      .|:|.::|..|.|:.:   ||
 Frog    72 KTTKDSLLAKEEEYKRLNAELEAKTAELVREAEEVMREQQELLSKPALTQVLLFDEDDDDVNLRK 136

  Fly   159 ---PDVVEV-----------------------------EVTQKRESTT-------------VVNG 178
               |:|..:                             .:::.|..||             :.:.
 Frog   137 LLSPEVPTLTLSHVKNHSKLDTKSSVLSRPPSANKGKKSISRARPRTTDTQAADNVAIPIDITDF 201

  Fly   179 QLKKQVTK---------------DNF-------------IKFLKAKVAILEE------------D 203
            .|.|.::|               |:.             |:|:|||:.:::|            |
 Frog   202 SLAKTISKIECDLEKGQLPENPEDDIIPGMNNEIGAEAQIRFMKAKLRVMQEELDSITHECNKKD 266

  Fly   204 HAQHAGELIRQKEQLEHALEAQRKSEHQRDQAINSNKHLSEQLMRSERQCEGFNQRQKEQQLEFI 268
            ...| ....|.||..|.....||.:..|:.|| ...|.|||:.          |::....|.:..
 Frog   267 DENH-NLTSRLKEVEEDRARLQRSANIQQTQA-EKYKALSEEA----------NKKSDGLQHQLS 319

  Fly   269 TQQRELEVLKRDAKVSRQTNINLENRLSRVQEDADAARQELKLLREEQRDQLEAHRK---ELKLR 330
            :.::|:|..||..|.|..:....|.||:|..|:|:..:.||..|::..:|.....||   ||:|.
 Frog   320 SLEKEVENFKRIQKQSASSQSATEVRLNRALEEAEKYKMELNKLKQSNKDTANQERKKIEELRLE 384

  Fly   331 DSRIRALKRQRGDLLNAYKKQLYMIDNLKRQTICLEQSAAIGFGEKEFNKVLDW 384
            :.:   |::|:.:|:..:||||.:||.||||.:.:|.:..:.|.|:||.|.|||
 Frog   385 NQK---LEKQKAELMAGFKKQLKLIDILKRQKMHIESAKMLSFTEEEFMKALDW 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4681NP_611937.2 SMC_prok_B <146..>347 CDD:274008 61/291 (21%)
tex9XP_002940302.3 SMC_prok_B 237..>411 CDD:274008 54/188 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG50184
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008332
OrthoInspector 1 1.000 - - oto104651
Panther 1 1.100 - - LDO PTHR23313
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5788
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.050

Return to query results.
Submit another query.