Protein Alignment CG4612 and elavl3

DIOPT Version :10

• Sequence 1: NP_611924.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: XP_009298008.1
• Gene: elavl3 / 30732
• ZFINID: ZDB-GENE-980526-76
• Length: 366
• Species: Danio rerio
• Alignment Length: 229
• Identity: 58/229 - (25%)
• Similarity: 100/229 - (43%)
• Gaps: 22/229 - (9%)

  Fly    78 TSTSSHSANVGVGVGGGALASGSTGGSGGNSSPDSGKIYIKNLERSIDNKAVYDTFSVFGNILNC 142
            |..|:....|..|..|.:|.:|....:.|.:......:.:..|.:::..:.....|...|.|.:|
Zfish     3 TIISTMETQVSNGPSGTSLPNGPVISTNGATDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESC 67

  Fly   143 NVAKDE-DGNSRGYGFVHFDSEEAARAAIEKVNGMLCNNQKVHVVKFIPRRDREQEKATHFKNLY 206
            .:.:|: .|.|.|||||::.....|..||..:||:....:.:.|     ...|....:....|||
Zfish    68 KLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKV-----SYARPSSASIRDANLY 127

  Fly   207 VKNLSEEFTEQHLREMFEPYGRITSHKLMLDE--EGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
            |..|.:..:::.:.::|..||||.:.::::|:  .|.||..||:.::....|..|:.||:|:
Zfish   128 VSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEAEEAIKGLNGQ--- 189

  Fly   270 DNKFLYVARALSKAERQQEINRKLEERKRQKAGQ 303
                    :.|..||   .|..|......||.||
Zfish   190 --------KPLGAAE---PITVKFANNPSQKTGQ 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_611924.1	PABP-1234	115..>303	CDD:130689	48/190 (25%)
elavl3	XP_009298008.1	ELAV_HUD_SF	35..365	CDD:273741	50/197 (25%)