Protein Alignment CG4612 and Pabpc4

DIOPT Version :10

• Sequence 1: NP_611924.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_001423635.1
• Gene: Pabpc4 / 298510
• RGDID: 1305015
• Length: 660
• Species: Rattus norvegicus
• Alignment Length: 191
• Identity: 97/191 - (50%)
• Similarity: 138/191 - (72%)
• Gaps: 5/191 - (2%)

  Fly   113 GKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVNGML 177
            |.::||||::||||||:|||||.|||||:|.|..||:| |:||.||||:::|||..||||:||||
  Rat    99 GNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGML 162

  Fly   178 CNNQKVHVVKFIPRRDREQE---KATHFKNLYVKNLSEEFTEQHLREMFEPYGRITSHKLMLDEE 239
            .|::||.|.:|..|::||.|   ||..|.|:|:||..||..:::|||:|..:|:..|.|:|.|..
  Rat   163 LNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCS 227

  Fly   240 GRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINRKLEERKRQK 300
            |:|:.||||:||..:.|..||..::||:: ..|.::|.||..|.|||.|:.||.|:.|:::
  Rat   228 GKSKGFGFVSYEKHEDANKAVEEMNGKEM-SGKSIFVGRAQKKVERQAELKRKFEQLKQER 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4612	NP_611924.1	PABP-1234	115..>303	CDD:130689	96/189 (51%)
Pabpc4	NP_001423635.1	PABP-1234	11..640	CDD:130689	97/191 (51%)