DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl and CKB2

DIOPT Version :10

Sequence 1:NP_523848.2 Gene:Ssl / 37909 FlyBaseID:FBgn0015300 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_193499.1 Gene:CKB2 / 827484 AraportID:AT4G17640 Length:282 Species:Arabidopsis thaliana


Alignment Length:189 Identity:85/189 - (44%)
Similarity:114/189 - (60%) Gaps:13/189 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DGSWIDWFLGIKGHEFSCRVPNEYIQDKFNLTGLE----FDSQTLEVVLDPE------FDNEDWD 65
            |.|||.||..::|:||.|.|.::||||.|||.||.    :....|:::||.|      |..|..:
plant    93 DTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSHQVPYYDYALDLILDVESSHGEMFTEEQNE 157

  Fly    66 CAEE--KKLYGMIHARYIVSPRGIEDMRLKYERGDFGSCPRVFCKRQKVLPVGLHDVWDKAQVKI 128
            ..|.  :.||||||||:|::.:|:..|..||:..|||.||||:|..|..||||..|:...:.|||
plant   158 LIESAAEMLYGMIHARFILTSKGLASMLDKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRASTVKI 222

  Fly   129 YCPSCNNVYIP-LPHNGMLDGAMFGTSFPHMFFMQLPSLIPSPPVEKYIPRIYGFQLHK 186
            |||.|.:||.| ..:.|.:|||.|||:|||:|.|....|.|....:.|..|::||:|||
plant   223 YCPKCEDVYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKASQSYTQRVFGFKLHK 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SslNP_523848.2 CK_II_beta 13..183 CDD:198153 80/182 (44%)
CKB2NP_193499.1 CK_II_beta 95..278 CDD:460114 80/182 (44%)

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