DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl and CKB3

DIOPT Version :10

Sequence 1:NP_523848.2 Gene:Ssl / 37909 FlyBaseID:FBgn0015300 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_191584.1 Gene:CKB3 / 825196 AraportID:AT3G60250 Length:276 Species:Arabidopsis thaliana


Alignment Length:189 Identity:81/189 - (42%)
Similarity:114/189 - (60%) Gaps:13/189 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DGSWIDWFLGIKGHEFSCRVPNEYIQDKFNLTGLE----FDSQTLEVVLDPEFDNEDWDCAEE-- 69
            |.|||.||..::|::|.|.|..:||||.|||.||.    :....|:::||.:..|.:....|:  
plant    87 DTSWISWFCNLRGNDFFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVDASNSEMFTDEQHE 151

  Fly    70 ------KKLYGMIHARYIVSPRGIEDMRLKYERGDFGSCPRVFCKRQKVLPVGLHDVWDKAQVKI 128
                  :.|||:||.|||::.:|:..|..||:..|||.||||||..|..||||..|:...:.|||
plant   152 MVESAAEMLYGLIHVRYILTTKGMAAMTEKYKNCDFGRCPRVFCCGQSCLPVGQSDIPRSSTVKI 216

  Fly   129 YCPSCNNVYIP-LPHNGMLDGAMFGTSFPHMFFMQLPSLIPSPPVEKYIPRIYGFQLHK 186
            |||.|.::..| ....|.:|||.|||:|||:|.|...:|.|..|.:.|:|:|:||::||
plant   217 YCPKCEDISYPRSKFQGNIDGAYFGTTFPHLFLMTYGNLKPQKPTQSYVPKIFGFKVHK 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SslNP_523848.2 CK_II_beta 13..183 CDD:198153 77/182 (42%)
CKB3NP_191584.1 CK_II_beta 89..272 CDD:198153 77/182 (42%)

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