DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl and csnk2b

DIOPT Version :10

Sequence 1:NP_523848.2 Gene:Ssl / 37909 FlyBaseID:FBgn0015300 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_571262.1 Gene:csnk2b / 30428 ZFINID:ZDB-GENE-990415-29 Length:215 Species:Danio rerio


Alignment Length:205 Identity:98/205 - (47%)
Similarity:128/205 - (62%) Gaps:21/205 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SWIDWFLGIKGHEFSCRVPNEYIQDKFNLTGLEFD----SQTLEVVLDPEFDNE------DWDCA 67
            |||.||.|::|:||.|.|..:|||||||||||...    .|.|:::||.|.|.|      ..|..
Zfish     8 SWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLI 72

  Fly    68 EE--KKLYGMIHARYIVSPRGIEDMRLKYERGDFGSCPRVFCKRQKVLPVGLHDVWDKAQVKIYC 130
            |:  :.|||:||||||::.|||..|..||::||||.||||:|:.|.:||:||.|:..:|.||:||
Zfish    73 EQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYC 137

  Fly   131 PSCNNVYIPLP---HNGMLDGAMFGTSFPHMFFMQLPSLIPSPPVEKYIPRIYGFQLHKKA---- 188
            |.|.:||.|..   |:  .|||.|||.||||.||..|...|..|..:::||:|||::|..|    
Zfish   138 PKCMDVYTPKSSRHHH--TDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQ 200

  Fly   189 LMPPESAESP 198
            |....|.:||
Zfish   201 LQAASSFKSP 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SslNP_523848.2 CK_II_beta 13..183 CDD:198153 91/184 (49%)
csnk2bNP_571262.1 CK_II_beta 8..191 CDD:198153 91/184 (49%)
KSSR motif. /evidence=ECO:0000250|UniProtKB:P67870 147..150 0/2 (0%)
Interaction with alpha subunit. /evidence=ECO:0000250 188..193 3/4 (75%)

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