DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ssl and Ste:CG33242

DIOPT Version :10

Sequence 1:NP_523848.2 Gene:Ssl / 37909 FlyBaseID:FBgn0015300 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_996426.2 Gene:Ste:CG33242 / 2768898 FlyBaseID:FBgn0053242 Length:171 Species:Drosophila melanogaster


Alignment Length:148 Identity:79/148 - (53%)
Similarity:97/148 - (65%) Gaps:2/148 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GIKGHEFSCRVPNEYIQDKFNLTGLEFDSQTLEVVLDPEFDNEDWDC-AEEKKLYGMIHARYIVS 83
            |.:....|||||.:|:||.||..|||:.|:.|:|:|.|..|:..... .:|||.|||||||||.|
  Fly    16 GSRATSSSCRVPTDYVQDTFNQMGLEYFSEILDVILKPVIDSSSGLLYGDEKKWYGMIHARYIRS 80

  Fly    84 PRGIEDMRLKYERGDFGSCPRVFCKRQKVLPVGLHDVWDKAQVKIYCPSCNNVYIPLPHNGMLDG 148
            .||:..|..||.||||||||.:.|.||..|||||..||.|:.|||:||.|.:.:.| ..:..|||
  Fly    81 ERGLIAMHRKYMRGDFGSCPNISCDRQNTLPVGLSAVWGKSTVKIHCPRCKSNFHP-KSDTQLDG 144

  Fly   149 AMFGTSFPHMFFMQLPSL 166
            ||||.|||.:||..||:|
  Fly   145 AMFGPSFPDIFFSMLPNL 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SslNP_523848.2 CK_II_beta 13..183 CDD:198153 79/148 (53%)
Ste:CG33242NP_996426.2 CK_II_beta 24..165 CDD:198153 77/140 (55%)

Return to query results.
Submit another query.