DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42383 and prom

DIOPT Version :8

Sequence 1:NP_523847.2 Gene:CG42383 / 37897 FlyBaseID:FBgn0259729 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001137754.1 Gene:prom / 246493 FlyBaseID:FBgn0259210 Length:1235 Species:Drosophila melanogaster

Alignment Length:179 Identity:41/180 (23%)
Similarity:64/180 (36%) Gaps:57/180 (32%)


  Fly    13 RHGVREEVARQYLSS------------NNWSLEVASSTYESEAVSKKQE----PEKSSEHSQANE 61
            |.|.|::...:..||            ...:|::|.   |....|::|:    |::..|..:...
  Fly   889 RSGKRDQSRERSTSSTARPKPPLRRTATEETLDLAD---EESTPSRQQQQQPPPQRRQESDRERV 950

  Fly    62 SNRDLHSLLSEISRRKEGDHDGYQACASDSSTDHDTPAGKRVNI------------NSSTPAITN 114
            ..||..|...|:||       |..|.|.      :||...|...            :||.|:..|
  Fly   951 RERDQRSRERELSR-------GRDASAM------NTPVRSRSRQQLRHDPEDDNWGSSSGPSRAN 1002

  Fly   115 N-DSDRS-------LRVWGHGNRLGSAHPINPPPRSATEDSDTEPADDE 155
            : :.||.       |.:|...|:..:     |..|..||:.|.|.|.|:
  Fly  1003 SRERDRESSQTRKILNIWQSRNKAKT-----PLRRQGTEEFDFEDAHDD 1046

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG42383NP_523847.2 UBA_TAP-C_like 10..39 CDD:270459 7/38 (18%)
SEP 155..242 CDD:197786 0/2 (0%)
p47_UBX 257..336 CDD:176365
promNP_001137754.1 Prominin 73..826 CDD:283200
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG2086
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.900

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