DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slik and PBS2

DIOPT Version :10

Sequence 1:NP_726441.1 Gene:Slik / 37893 FlyBaseID:FBgn0035001 Length:1703 Species:Drosophila melanogaster
Sequence 2:NP_012407.2 Gene:PBS2 / 853313 SGDID:S000003664 Length:668 Species:Saccharomyces cerevisiae


Alignment Length:311 Identity:107/311 - (34%)
Similarity:159/311 - (51%) Gaps:37/311 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EMVGELGDGAFGKVYKAQHKEQKRFAAAKMCQLE-DEENLSDHMVEIDILSEIKHPNIVELYEAF 101
            |.:.|||.|.:|.|.|..||......|.|..:|| ||......::|:::|.:...|.||:.|.||
Yeast   361 EFLDELGHGNYGNVSKVLHKPTNVIMATKEVRLELDEAKFRQILMELEVLHKCNSPYIVDFYGAF 425

  Fly   102 SIDDKLWMLIEYCDGGALDSIMVELEK--PLTEPQIAYVCKHMTEGLTFL-HRNKVIHRDLKAGN 163
            .|:..::|.:||.|||:||.|..|..:  .:.|||:|::...:..||..| .::.:||||:|..|
Yeast   426 FIEGAVYMCMEYMDGGSLDKIYDESSEIGGIDEPQLAFIANAVIHGLKELKEQHNIIHRDVKPTN 490

  Fly   164 VLLTM-EGGVKLADFGVSAKNKHTMQKHDTFIGTPYWMAPELVLCETFRDNP----YDHKVDIWS 223
            :|.:. :|.|||.|||||.....::.|  |.||...:||||.:...    ||    |..:.||||
Yeast   491 ILCSANQGTVKLCDFGVSGNLVASLAK--TNIGCQSYMAPERIKSL----NPDRATYTVQSDIWS 549

  Fly   224 LGITLIELA---QMEPPNSEMSPMRVLLKIQKSEPPKLEQPS-RWSKEFNDFLKKSLVKDPQVRP 284
            ||::::|:|   ...||.:..:....|..|....||:|  || ::|.:..||:...|.|.|:.||
Yeast   550 LGLSILEMALGRYPYPPETYDNIFSQLSAIVDGPPPRL--PSDKFSSDAQDFVSLCLQKIPERRP 612

  Fly   285 TTDVLMQHAFI--NRNLDAKPIKDLLLEYKAEVVEEVVDDETEEPRNSALQ 333
            |...|.:|.::  .||.|..     :.||..|.:|.         ||..|:
Yeast   613 TYAALTEHPWLVKYRNQDVH-----MSEYITERLER---------RNKILR 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlikNP_726441.1 STKc_SLK_like 31..310 CDD:132942 100/286 (35%)
PKK 958..1095 CDD:463600
PKK 1126..1266 CDD:463600
PBS2NP_012407.2 PKc_PBS2_like 358..644 CDD:132953 104/304 (34%)
Blue background indicates that the domain is not in the aligned region.

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