DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slik and stk24a

DIOPT Version :10

Sequence 1:NP_726441.1 Gene:Slik / 37893 FlyBaseID:FBgn0035001 Length:1703 Species:Drosophila melanogaster
Sequence 2:NP_001103921.1 Gene:stk24a / 555297 ZFINID:ZDB-GENE-070424-52 Length:415 Species:Danio rerio


Alignment Length:380 Identity:136/380 - (35%)
Similarity:210/380 - (55%) Gaps:42/380 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 NIKMDTDPAEFWEMVGELGDGAFGKVYKAQHKEQKRFAAAKMCQLED-EENLSDHMVEIDILSEI 89
            |:|:  ||.:.:..:..:|.|:||:|:|......::..|.|:..||: |:.:.|...||.:||:.
Zfish     8 NLKL--DPEKLFTKLERIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEVEDIQQEITVLSQC 70

  Fly    90 KHPNIVELYEAFSIDDKLWMLIEYCDGG-ALDSIMVELEKP--LTEPQIAYVCKHMTEGLTFLHR 151
            ....|.:.:.::..|.|||:::||..|| |||     |..|  |.|..||.:.:.:.:||.:||.
Zfish    71 DSLFITKYFGSYLKDTKLWIIMEYLGGGSALD-----LLGPGALDETHIATILREILKGLDYLHS 130

  Fly   152 NKVIHRDLKAGNVLLTMEGGVKLADFGVSAKNKHTMQKHDTFIGTPYWMAPELVLCETFRDNPYD 216
            .|.||||:||.||||:.:|.||||||||:.:...|..|.:||:|||:|||||::     :.:.||
Zfish   131 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-----KQSEYD 190

  Fly   217 HKVDIWSLGITLIELAQMEPPNSEMSPMRVLLKIQKSEPPKLEQPSRWSKEFNDFLKKSLVKDPQ 281
            .|.||||||||.||||:.|||:|::.||:||..|.|..||.||  ..::|...:|:...|.|||.
Zfish   191 SKADIWSLGITAIELAKGEPPHSDLHPMKVLFLIPKENPPTLE--GNYNKALKEFVDACLNKDPN 253

  Fly   282 VRPTTDVLMQHAFINR-NLDAKPIKDLLLEYKAEVVEEVVDDETEEPRNSALQLDLDDDSASLQS 345
            .|||...|::|..|.| :.....:.||:.:||...:::..::.:.:.       |.|::.||.:|
Zfish   254 FRPTAKELLKHKLIVRYSKKTSYLMDLIDKYKKWKLKQAREESSSDS-------DSDEEEASGES 311

  Fly   346 QDIDKLPGTPTSILRDAKEQSQPSSSL-PIAAAATAAAAATTTTKATTPDRPNHT 399
            .:.|.:..|.|    ::|...:|:..| |:           .......||||..:
Zfish   312 VNDDWIFNTIT----ESKPIQEPNRVLKPV-----------ENKPKKVPDRPKRS 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlikNP_726441.1 STKc_SLK_like 31..310 CDD:132942 116/283 (41%)
PKK 958..1095 CDD:463600
PKK 1126..1266 CDD:463600
stk24aNP_001103921.1 STKc_MST3_like 15..288 CDD:270786 116/284 (41%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.