DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slik and gck-1

DIOPT Version :10

Sequence 1:NP_726441.1 Gene:Slik / 37893 FlyBaseID:FBgn0035001 Length:1703 Species:Drosophila melanogaster
Sequence 2:NP_505310.2 Gene:gck-1 / 179274 WormBaseID:WBGene00001526 Length:803 Species:Caenorhabditis elegans


Alignment Length:577 Identity:176/577 - (30%)
Similarity:257/577 - (44%) Gaps:141/577 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EAKK--KRLYNNIKMDTDPAEFWEMVGELGDGAFGKVYKAQHKEQKRFAAAKMCQLED-EENLSD 78
            |.:|  |.:.:|.|:  ||...:.....:|.|:||:|||.......|..|.|:..||. |:.:.|
 Worm   164 ERRKVVKPIEDNSKL--DPEVIFTKQERIGRGSFGEVYKGIDNRTGRVVAIKIIDLEQAEDEIED 226

  Fly    79 HMVEIDILSEIKHPNIVELYEAFSIDDKLWMLIEYCDGG-ALDSIMVELEK--PLTEPQIAYVCK 140
            ...||.:||:.....:.:.:.:|....|||:::||..|| |||     |.|  .|.|..||.:.:
 Worm   227 IQQEIQVLSQCDSQYVTKYFGSFLKGSKLWIIMEYLGGGSALD-----LTKSGKLDESHIAVILR 286

  Fly   141 HMTEGLTFLHRNKVIHRDLKAGNVLLTMEGGVKLADFGVSAKNKHTMQKHDTFIGTPYWMAPELV 205
            .:.:||.:||..:.||||:||.|||::..|.||:|||||:.:...|::|..||:|:|:||||||:
 Worm   287 EILKGLEYLHSERKIHRDIKAANVLVSEHGDVKVADFGVAGQLTETVKKRITFVGSPFWMAPELI 351

  Fly   206 LCETFRDNPYDHKVDIWSLGITLIELAQMEPPNSEMSPMRVLLKIQKSEPPKLEQPSRWSKEFND 270
                 :.:.||:|.||||||||.||||..|||:|::.|||||..|.|:.||.| |.|:|||.|.:
 Worm   352 -----KQSSYDYKADIWSLGITAIELANGEPPHSDLHPMRVLFLIPKNPPPVL-QGSQWSKPFKE 410

  Fly   271 FLKKSLVKDPQVRPTTDVLMQHAFINRNLDAKPIKDLL---LEYKAEVVEEVVDDETEEPRNSAL 332
            |::..|.|||:.||:...|::|.||.|......:.||:   .||:...  .|..|.         
 Worm   411 FVEMCLNKDPENRPSASTLLKHQFIKRAKKNSILVDLIERAAEYRLRT--GVSSDS--------- 464

  Fly   333 QLDLDDDSASLQSQDIDKLPGTPTSILRDAKEQSQPSSSLPIAAAATAAAAATTTTKATTPDRPN 397
              |||:||                                       .....|:.....|...|.
 Worm   465 --DLDEDS---------------------------------------DGGGGTSKWDYPTVRGPR 488

  Fly   398 HTKDDNAEAAAQQPPHTKVPAPAPPSSQQTPPPQVQ-QPPTPPAQPTAAVLQKKPEDVAAVAE-- 459
            .:.||:...                 .|:|..|:.| ...:|...|...:::..|: ||||||  
 Worm   489 VSADDDGTV-----------------RQRTDRPRAQVDRRSPSGSPGGTIVRGSPQ-VAAVAEQL 535

  Fly   460 -----------------TSEKTESD--KKHFVKKGKAPPPPSPLGLANAKPAASDSQTSPKKLAT 505
                             :|:...|.  :.|....|.|  ....||..|..|.:|.::|  :.:.:
 Worm   536 RNSSVGSSGYGSGGNSASSQYATSSLPQSHTASSGGA--TTITLGSPNGSPTSSLART--QSMVS 596

  Fly   506 PEPTSPVTTAIEVAIGQEA-------MEPKPQPPSPTASSIVSVQSV---ASSSSSG 552
            |.             ||.:       :|...:|.|...||.||....   .:|||:|
 Worm   597 PS-------------GQRSGSAQSWELERGNRPMSERVSSQVSPSKYNQHRTSSSNG 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlikNP_726441.1 STKc_SLK_like 31..310 CDD:132942 119/285 (42%)
PKK 958..1095 CDD:463600
PKK 1126..1266 CDD:463600
gck-1NP_505310.2 STKc_MST3_like 183..455 CDD:270786 118/282 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.