DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-A and chrm5a

DIOPT Version :10

Sequence 1:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster
Sequence 2:NP_001018639.1 Gene:chrm5a / 553978 ZFINID:ZDB-GENE-080723-32 Length:490 Species:Danio rerio


Alignment Length:715 Identity:222/715 - (31%)
Similarity:304/715 - (42%) Gaps:277/715 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 YSLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAV 163
            :||..::.:..|:||:|.:|:.||::||:|||::.||:|::||:|.|||.||..||..||.|:..
Zfish    20 HSLWEVIAIATVSAIVSFITIIGNILVMLSFKVNSQLKTVNNYYLLSLAFADLIIGVFSMNLYTS 84

  Fly   164 TTILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVMIGAA 228
            ..::|||.||.:.||.||||||:||||||:|||:||||||||:|||||||||||...|.:|||.|
Zfish    85 YILMGYWALGSLACDLWLALDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTPKIAGIMIGLA 149

  Fly   229 WGISLLLWPPWIYSWPYIEGKRTVPKDECYIQFIETNQYITFGTALAAFYFPVTIMCFLYWRIWR 293
            |.:|.:||.|.|..|.|..||||||:.:|.|||. :...||||||:|||||||::|..||..|::
Zfish   150 WLVSFILWAPPILCWQYFVGKRTVPERQCQIQFF-SEPVITFGTAIAAFYFPVSVMTILYCLIYK 213

  Fly   294 ETKKRQKDLPNLQAGKKDSSKRSNSSDENTVVNHASGGLLAFAQVGGNDHDTWRRPRSESSPDAE 358
            ||::|.|||..||.        .|||                               :.||.||:
Zfish   214 ETERRTKDLAELQG--------INSS-------------------------------TNSSGDAQ 239

  Fly   359 SVYMTNMVIDSGYHGMH----SRKSSIKSTN---TIKKSYTCFGSIKEWCIAWWHSGREDSD--- 413
            .     ..|.|.:...|    ||..::..||   |:....|.|.|         ::..|:.|   
Zfish   240 P-----QKIRSCFGCKHVSNTSRTQALSHTNAAKTLDDQLTNFNS---------YASSEEEDRSG 290

  Fly   414 ---DFAYEQEEPSDLGYATPVTIETPLQSS---VSRCTSMNVMRDNYSMGGSVSGVRPPSILLSD 472
               :....||..|: .|.......||:::|   ..:|.|..              .:|     .|
Zfish   291 NFQESCRHQENKSE-SYEEENFFPTPVKASPTKTKKCVSYK--------------FKP-----KD 335

  Fly   473 VSPTPLPRPPLASISQLQEMSAVTASTTANVNTSGNGNGAINNNNNASHNGNGAVNGNGAGNGSG 537
            |||                                     :.|.|                    
Zfish   336 VSP-------------------------------------LKNTN-------------------- 343

  Fly   538 IGLGTTGNATHRDSRTLPVINRINSRSVSQDSVYTILIRLPSDGASSNAANGGGGGPGAGAAASA 602
                                                                |...|||.:.:||
Zfish   344 ----------------------------------------------------GDAKPGASSFSSA 356

  Fly   603 SLSMQGDCAPSIKMIHEDGPTTTAAAAPLASAAATRRPLPSRDSEFSLPLGRRMSHAQHDARLLN 667
            .         |:     :.|::::::.|:...                               |.
Zfish   357 E---------SV-----NAPSSSSSSKPIDGT-------------------------------LK 376

  Fly   668 AKVIPKQLGKAGGGAAGGGVGGAHALMNARNAAKKKKKSQEKRQESKAAKTLSAILLSFIITWTP 732
            .::                               .|:|.....:|.|||:|||||||:||:||||
Zfish   377 CQI-------------------------------TKRKRMVLIKEKKAAQTLSAILLAFILTWTP 410

  Fly   733 YNILVLIKPLTTCSDCIPTELWDFFYALCYINSTINPMCYALCNATFRRTYVRILTCKWHTRNRE 797
            |||:|||.  |.||||||..||...|.|||:|||:|||||||||.||::|:..:|.|:|..:..|
Zfish   411 YNIMVLIS--TFCSDCIPLSLWHLGYWLCYVNSTVNPMCYALCNKTFQKTFRMLLLCQWRKQRAE 473

  Fly   798  797
            Zfish   474  473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-ANP_523844.2 7tmA_mAChR_DM1-like 105..>300 CDD:320428 112/194 (58%)
TM helix 1 106..132 CDD:320428 12/25 (48%)
TM helix 2 139..165 CDD:320428 13/25 (52%)
TM helix 3 177..207 CDD:320428 25/29 (86%)
TM helix 4 219..242 CDD:320428 11/22 (50%)
TM helix 5 265..294 CDD:320428 17/28 (61%)
7tm_GPCRs <707..783 CDD:475119 50/75 (67%)
TM helix 6 716..738 CDD:410628 17/21 (81%)
TM helix 7 751..776 CDD:410628 16/24 (67%)
chrm5aNP_001018639.1 7tmA_mAChR_M5 26..459 CDD:320427 215/693 (31%)
TM helix 1 27..53 CDD:320427 12/25 (48%)
TM helix 2 60..86 CDD:320427 13/25 (52%)
TM helix 3 98..128 CDD:320427 25/29 (86%)
TM helix 4 140..163 CDD:320427 11/22 (50%)
TM helix 5 185..214 CDD:320427 17/28 (61%)
TM helix 6 388..418 CDD:320427 22/29 (76%)
TM helix 7 427..452 CDD:320427 16/24 (67%)

Return to query results.
Submit another query.