DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp3 and caiC

DIOPT Version :10

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_414579.4 Gene:caiC / 944886 ECOCYCID:EG11558 Length:517 Species:Escherichia coli


Alignment Length:566 Identity:144/566 - (25%)
Similarity:240/566 - (42%) Gaps:84/566 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 GGFTVARCFQDQARRRPKKTCFVMDD-----RHLSFAEALEFSQKIAGYFSDRGLERGDCVALLM 170
            ||..:.:.:.|.|.....||..:.:.     ...|:.|..:...:.|..|...|:.:||.|||.:
E. coli     5 GGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHL 69

  Fly   171 ETRLEYPCIWLGLSQLGVITALINSNLRGESLLHSIKVANAKALIVGSELLDVLVSLREKEQLDE 235
            :...|:...|.||:::|.|...||:.|..|.....::.:.|..|:..::.               
E. coli    70 DNCPEFIFCWFGLAKIGAIMVPINARLLCEESAWILQNSQACLLVTSAQF--------------- 119

  Fly   236 VPIYQYTDDE----VRGVAGHDLLPGAVDLVTALKTQKKLELPSAVC---PGEARSKLLYVYTSG 293
            .|:||....|    :|.:...|:...|.|.|::. ||.|.:.|:.:|   |.........::|||
E. coli   120 YPMYQQIQQEDATQLRHICLTDVALPADDGVSSF-TQLKNQQPATLCYAPPLSTDDTAEILFTSG 183

  Fly   294 TTGLPKAAVIT--NLRFLFMSAGSY--YMLKMSSDDVVYDPLPLYHTAGGIVGVGNAILNGSTVV 354
            ||..||..|||  ||||    ||.|  :...:..|||....:|.:|..........|...|:|.|
E. coli   184 TTSRPKGVVITHYNLRF----AGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFV 244

  Fly   355 LRKKFSARNFWLDCDRHNCTVAQYIGELCRYLLATSYSPDQQKHNLR-LMYGNGLRPQIWSQFVR 418
            |.:|:|||.||....::..||.:.|..:.|.|:....|.:.|:|.|| :|:...|..|....|..
E. coli   245 LVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDQQHRLREVMFYLNLSEQEKDAFCE 309

  Fly   419 RFGIPHIGEIYGATEGNSNLINITN----------RVGAIGFVPVYGSSLYPVQVLRCDEYTGEL 473
            |||: .:...||.||   .::.|..          .:|.:||       .|..::.  |::...|
E. coli   310 RFGV-RLLTSYGMTE---TIVGIIGDRPGDKRRWPSIGRVGF-------CYEAEIR--DDHNRPL 361

  Fly   474 LKDSKGH-CIRCQPGQAGLLVGKVDARRAVSAFHGYADKGASEQKLLRNVFTSGDVFFNSGDMVV 537
            .....|. ||:..||:              :.|..|.....:..|:|     ..|.:.::||...
E. coli   362 PAGEIGEICIKGIPGK--------------TIFKEYFLNPQATAKVL-----EADGWLHTGDTGY 407

  Fly   538 RDILGYFYFKDRTGDTFRWRGENVATQEVEAIITNCVGLEDCVVYGVQIPHVEGKAGMAAIV--D 600
            ||...:|||.||..:..:..||||:..|:|.||.....::|.||.|:: ..:..:|..|.:|  :
E. coli   408 RDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIK-DSIRDEAIKAFVVLNE 471

  Fly   601 PERKVDMDYLSVVLRGSLPPYARPLFIRLLDEIPRTATFKLKKREL 646
            .|...:.::.. ....::..:..|.::.:..::||..:.|:.::.|
E. coli   472 GETLSEEEFFR-FCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNL 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 hsFATP4_like 136..653 CDD:341262 138/541 (26%)
caiCNP_414579.4 caiC 1..517 CDD:181195 144/566 (25%)

Return to query results.
Submit another query.