DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp3 and slc27a4

DIOPT Version :10

Sequence 1:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster
Sequence 2:NP_001017737.1 Gene:slc27a4 / 550432 ZFINID:ZDB-GENE-050417-248 Length:643 Species:Danio rerio


Alignment Length:677 Identity:268/677 - (39%)
Similarity:391/677 - (57%) Gaps:59/677 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LKQKLATRLGTILLATVIFGAFCWDNALASLTL-----GAVVALLLRNPTFVFALVMTASRDLKA 94
            |:...||.|   |....:|....|...|.|:.:     |...:|      :||:  .|..|||.|
Zfish     2 LRLACATAL---LFVLRLFIGLPWWQVLPSILIFYVGSGGWKSL------YVFS--KTIYRDLHA 55

  Fly    95 FQRFVALNIYLLRKDRGGFTVARCFQDQARRRPKKTCFVMD--DRHLSFAEALEFSQKIAGYFSD 157
            ....:.:.:.:.:..|...||.:.|....::...||..:.:  |...||.|..|:|.::|.:...
Zfish    56 ASVLLRVKLNVKKHLRERNTVPKLFAKSVKKYGNKTALIFEGTDEKWSFKELDEYSNRVANFLLQ 120

  Fly   158 RGLERGDCVALLMETRLEYPCIWLGLSQLGVITALINSNLRGESLLHSIKVANAKALIVGSELLD 222
            :|...||.|||.||.|.:|..:|||::::||..||||.|||.|:|:|.:.:::|||::.||||.:
Zfish   121 QGFREGDVVALFMENRHQYVGLWLGMAKIGVEAALINFNLRLEALVHCVNISSAKAVVFGSELTE 185

  Fly   223 VLVSLREKEQLDEVPIYQYTDDEVRGVAGHDLLPGAVDLVTALKTQKK------------LELPS 275
            .:..:                        |..:...|.|..:.:...|            ||..|
Zfish   186 AMCEV------------------------HSSMGKTVKLFVSGEWDPKRVPVGTEHLDPLLETTS 226

  Fly   276 AVCPGEA-RS---KLLYVYTSGTTGLPKAAVITNLRFLFMSAGSYYMLKMSSDDVVYDPLPLYHT 336
            .:.|.:. ||   :|.|:|||||||:||||::.:.|:..|:|..||..:|..:||:||.|||||:
Zfish   227 TIQPKQPDRSFTDRLFYIYTSGTTGMPKAAIVVHSRYYRMAALVYYGFRMKPEDVLYDCLPLYHS 291

  Fly   337 AGGIVGVGNAILNGSTVVLRKKFSARNFWLDCDRHNCTVAQYIGELCRYLLATSYSPDQQKHNLR 401
            ||.|||:|..:::|.|||:||||||..||.||.::|||:.|||||:|||||.......::||.:|
Zfish   292 AGNIVGIGQGLIHGMTVVIRKKFSASKFWDDCIKYNCTIVQYIGEICRYLLNQPRKDTERKHKVR 356

  Fly   402 LMYGNGLRPQIWSQFVRRFGIPHIGEIYGATEGNSNLINITNRVGAIGFVPVYGSSLYPVQVLRC 466
            :..|||||..||.:|..||.:|.|.|.|||||.|.:|.|..|:.||.||.......:||:::::.
Zfish   357 MALGNGLRQSIWEEFTNRFNVPQIAEFYGATECNCSLGNFDNKTGACGFNSRILPYVYPIRLVKV 421

  Fly   467 DEYTGELLKDSKGHCIRCQPGQAGLLVGKVDARRAVSAFHGYADKGASEQKLLRNVFTSGDVFFN 531
            ||.|.||::...|.||.|.||:.|.|||::.....:..|.||.::.|:.:|:.::||..||..:.
Zfish   422 DEETMELIRGPDGVCIPCGPGEPGQLVGRIIQNDPLRRFDGYVNQTATNKKIAQDVFKKGDSAYL 486

  Fly   532 SGDMVVRDILGYFYFKDRTGDTFRWRGENVATQEVEAIITNCVGLEDCVVYGVQIPHVEGKAGMA 596
            |||::|.|..||.||:|||||||||:||||:|.|||..::..:.::|.|||||::|..|||||||
Zfish   487 SGDVLVMDDFGYMYFRDRTGDTFRWKGENVSTTEVEGTLSRLLDMKDVVVYGVEVPGAEGKAGMA 551

  Fly   597 AIVDPERKVDMDYLSVVLRGSLPPYARPLFIRLLDEIPRTATFKLKKRELAKEAYDIGQLSDPIY 661
            ||.|||...|:...|..|..:|||||||:|:|.|.|:.:|.|||.:|.::.::.:|...:||.:|
Zfish   552 AIADPENNTDLAKFSRDLEKALPPYARPVFLRFLPEVDKTGTFKFQKTDMRRDGFDPNIVSDKLY 616

  Fly   662 YLNR-DGIYRPLSQEQHELLRSGKAGL 687
            :|:| .|.|..|:.|.|..:.|||..|
Zfish   617 FLDRTKGQYVELNAELHRNIVSGKQKL 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp3NP_726437.2 hsFATP4_like 136..653 CDD:341262 229/532 (43%)
slc27a4NP_001017737.1 hsFATP4_like 99..608 CDD:341262 229/532 (43%)

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