DRSC/TRiP Functional Genomics Resources

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Protein Alignment sei and LOC1279939

DIOPT Version :10

Sequence 1:NP_476713.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_061513533.1 Gene:LOC1279939 / 1279939 VectorBaseID:AGAMI1_011151 Length:580 Species:Anopheles gambiae


Alignment Length:523 Identity:113/523 - (21%)
Similarity:217/523 - (41%) Gaps:97/523 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 DQKLQNNY----YHKWTLLH-YSPFKAVWDWIILILVMYTAIFTPYVAAFLLGEQDYQRRNSKYI 359
            :::||..:    .|.::||. ||      |.::.|::....:..|:..:||.    ::.|.::::
Mosquito    64 NERLQQCFPAFIIHPFSLLRLYS------DVVVFIVMNLHLMLLPFAFSFLA----FETRPTRHL 118

  Fly   360 NSDPIVIIDLIVDVTFIVDIIINFRTTFVNSQ-DEVVSHPGRIAVHYLSGWFLI-DLVAAVP--- 419
                :..|||.:.|..:|:..:.|.|.||..: :|:|.:|.:|..:.|..:.|: ||:...|   
Mosquito   119 ----VEYIDLSLCVILVVEFALTFCTGFVVLETNEIVLNPRKIFFNRLRPFRLMYDLLLFFPYIL 179

  Fly   420 ----FDLLLVGSDTDETTTLIGLLKTARLLRLVRVARKIDRY----------SEYGAAVLILLMA 470
                ||.|:|.:..:.:...:..|....:.|.    |..:||          |:....::.::|.
Mosquito   180 LLEVFDELIVEAGAEASLVFVSFLYLCNIARF----RDSNRYFSVIPRSLDISQSKMRIVEVIMN 240

  Fly   471 TFILIAHWLACIWYAI------------GNAEKSIASKNIGWLN-SLAYD-IQEPYFDNRTG--G 519
            | :.:.||..|:.|.|            .:.|:.:|:.::...| |.|.: :..|:...|..  .
Mosquito   241 T-LYVLHWTTCLGYIIPVLLKVDSSARTSDEEELLAAMHLPQPNVSAALERVANPFVRVRLTDLD 304

  Fly   520 PSIKSRYITALYFTFTSLTSVGFGNVAPNTDAEKAFTI-----CVMLVGSLMYASIFGNVSAIIQ 579
            .|...||:.::..|.    .||..: :...|.|:.:..     .||.:|.|.    |..|..::.
Mosquito   305 TSTAYRYLRSMMITL----RVGLAS-SEKKDIEEHYVYHWIMWLVMFLGWLW----FNYVPVVLC 360

  Fly   580 RLYS----GTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWTYTNGIDMNSLLKGFPECLQ 640
            |.:.    .|.:|...|..::.|:...::...|.::|...|...:. |...|...::..||..|:
Mosquito   361 RFFDSPEMATDQYDKFMANLKAFVYNKRLSATLERKLRNNFATRFR-TRYFDEEMIMGLFPSNLR 424

  Fly   641 ADICLHLNRKLLTTCAAFSEAS-------PGCLRAFSLKFKTTHAPPGDILVHRGDVLTSLYFIA 698
            :.|.:...|.|:.:...|....       ..||: ..:..:      .|:::..|....|:||:|
Mosquito   425 SSIRMETCRHLVASVDLFKNLPYFILTDIVNCLQ-LEVYLR------DDVIIAAGSYGDSMYFLA 482

  Fly   699 RGSIEIQRAGNIVVLG---KNDIFGENPCIYPTVGKSNGVVRALTYCDIHKLHRDDLLDVLDSYP 760
            .|::.:. |.|...||   ....|||...|.....::..|| ||..|:|::|..:|..:|:..:.
Mosquito   483 AGTVAVY-AMNGKELGHLTDGAYFGEISLIRRNQQRTANVV-ALEACEIYRLSHEDFQNVVKPHA 545

  Fly   761 EFL 763
            ..|
Mosquito   546 YLL 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_476713.1 Ion_trans 322..583 CDD:459842 63/300 (21%)
CAP_ED 657..767 CDD:237999 28/117 (24%)
LOC1279939XP_061513533.1 None

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