DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3163 and CG5953

DIOPT Version :10

Sequence 1:NP_611872.1 Gene:CG3163 / 37836 FlyBaseID:FBgn0034961 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_609796.1 Gene:CG5953 / 34985 FlyBaseID:FBgn0032587 Length:701 Species:Drosophila melanogaster


Alignment Length:171 Identity:43/171 - (25%)
Similarity:72/171 - (42%) Gaps:24/171 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 SHASGATIKEVEIVVPANNRLLSARRKSVPDSIKSPPG-DSESPQCKRIVTQNQTKLISNQSPSQ 251
            |::|......:::|..|.:..::..:.:....|..|.| |:.:|    .:..|..||....|   
  Fly   533 SYSSAGEESRLQLVDMAQDLRVAQAKANFGAFILPPRGSDASTP----AMPLNMRKLTGAGS--- 590

  Fly   252 KANHITRKRSSSVSSQISEDNEP------------PPGKFRADISTIDFERLFSLALKSADSQLD 304
             |.|:...........:|:..||            .||..::.:|.   :...:.:...|:|...
  Fly   591 -AGHMLMNSLLGSRESMSDGEEPDPDNDEATESAASPGHIKSSVSA---QAAVAASAFYAESLNR 651

  Fly   305 DHFSNFGKIIAHKLRSMDGTQAIYAEKIIADVLYQGQMKML 345
            |.....|..::.|||:||.||.|.|||:|::|||.||...|
  Fly   652 DDCDFIGSNVSLKLRTMDRTQRIIAEKLISEVLYYGQFNEL 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3163NP_611872.1 MADF 6..100 CDD:214738
CG5953NP_609796.1 MADF 85..171 CDD:214738
Blue background indicates that the domain is not in the aligned region.

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