DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: CG10904 and CG5953

Sequence 1:NP_001286800.1 Gene:CG10904 FlyBaseID:FBgn0034945 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001260503.1 Gene:CG5953 FlyBaseID:FBgn0032587 Length:701 Species:Drosophila melanogaster

Alignment Length:99 Identity:28/100 (28%)
Similarity:45/100 (45%) Gaps:4/100 (4%)


  Fly    24 WTREKIAKLIELYRSSDCLWNHYSELYKNKDCRAKAIESICASLEITKHDYGKKVHNLRNQFNAE 88
            ||.:...:|||.||....|||.....||:|.||.:|...|......:|.:..:|::.|..|:..|
  Fly    78 WTNDDALELIEQYRCHTELWNRADPKYKDKLCRFRAWSEIAERFGCSKAEVERKMNVLLTQYRRE 142

  Fly    89 LKKLERRLEESGGDRDSEKACRWEHFKTLMFLRS 122
            ..|:..::.:......|    :|..||...|:.:
  Fly   143 KHKMFVKIYQGIQPNPS----KWYAFKRFDFMEA 172

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG10904NP_001286800.1 MADF 31..125 CDD:214738 26/93 (28%)
CG5953NP_001260503.1 MADF_DNA_bdg 86..170 CDD:287510 26/88 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_2CZ4Q
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR21505
RoundUp 00.000 Not matched by this tool.
22.000

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