DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10904 and CG4404

DIOPT Version :10

Sequence 1:NP_611860.1 Gene:CG10904 / 37817 FlyBaseID:FBgn0034945 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster


Alignment Length:317 Identity:59/317 - (18%)
Similarity:107/317 - (33%) Gaps:109/317 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KLIELYRSSDCLWNHYSELYKNKDCRAKAIESICASLEITKHDYGKKVHNLRNQFNAELKKLERR 95
            :.::...:..||||:....|..|:...:|.:.:...::.|..:..::...:|:.|...||.  .|
  Fly    17 RFVQFVENQPCLWNYTHPGYSKKEDVQRAWQQVANDIKDTVRNCRERWRTIRSSFLRSLKL--AR 79

  Fly    96 LEESGGDRDSEKACRWEHFKTLMFL------RSVIEPRPGYQQGAPGKKLVSK------------ 142
            .:...|.|      ::...|.|.||      ||..:..||.....||:...::            
  Fly    80 TQTGRGKR------KYYLSKYLQFLVPFTKSRSCHKQLPGMVLRKPGQAATAQQEDEVVAAEEEA 138

  Fly   143 --------LDMCYPDQDVEKQSQSSIES--------LESMIIENDAE---------ICQPPKVSE 182
                    ||:...:::..:..:...|.        |.|:.:|:|:.         :.|...||.
  Fly   139 KVSDGEMPLDVQVSEEEHRRNQEQDREQPTACLPLRLHSIKVEHDSSNANQQLERMVSQQSLVSV 203

  Fly   183 PI-----------------------------------PPMPPEPAPSSKFVDPNRTVEAPAAPSP 212
            |.                                   ||.||:||.|:..|....          
  Fly   204 PAAALGNHLGWSDLTQWFKGHGSGHHKLTTTTTTPTSPPPPPQPATSALSVFTGG---------- 258

  Fly   213 FHLPLSGRDQWDA-FGELIASE--FRNLNSEVSRKRLKRKIMQVMLEVGEEDDLTNS 266
               |..|..|.|| :..||:..  .:.:|.:.:|| .::|:      ||..||:.::
  Fly   259 ---PGGGGSQPDADYSFLISLHPYIKEMNGKQNRK-FRQKV------VGLIDDILDN 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10904NP_611860.1 MADF 31..125 CDD:214738 21/99 (21%)
CG4404NP_572838.2 MADF 17..103 CDD:214738 19/93 (20%)
BESS 267..301 CDD:460758 10/40 (25%)

Return to query results.
Submit another query.