DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10904 and CG4004

DIOPT Version :10

Sequence 1:NP_611860.1 Gene:CG10904 / 37817 FlyBaseID:FBgn0034945 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_727638.2 Gene:CG4004 / 32226 FlyBaseID:FBgn0030418 Length:359 Species:Drosophila melanogaster


Alignment Length:212 Identity:55/212 - (25%)
Similarity:85/212 - (40%) Gaps:59/212 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KLIELYRSSDCLWNHYSELYKNKDCRAKAIESICASLEITK--------HDYGKKVHNLRNQFNA 87
            |.:.||||...||...|:||:::..:   :||....||:.:        |...:|::|.|..:..
  Fly    13 KFLGLYRSMPELWLVRSKLYRDRQLK---LESYSRLLELLRTTDSYANIHTLKRKINNFRTSYRR 74

  Fly    88 ELKKLERRLEESGGDRDSEKACRWEHFKTLMFLRSVIEPRPGYQQ----GAPGKKLV-------- 140
            ||    |::.:||   ::.|...| :||.|.||   .|...|..|    .|..:.||        
  Fly    75 EL----RKVLDSG---NTYKPTLW-YFKELDFL---YELETGELQLEGIVAADRDLVRNSKVLQN 128

  Fly   141 -SKLDMCYPDQDVEKQ-SQSSIESLESMIIENDAEICQPPK------VSEPIP------------ 185
             |...:.:..|..|:: |.|.|...|..:.||..|..|..:      :|:..|            
  Fly   129 ESNKTITFGAQLAEQEVSMSFIVKREIEVDENITEDMQQLETEDVDIMSDAFPHEEDMLRLDAVG 193

  Fly   186 --PMPPEPAPSSKFVDP 200
              .:.|||.|.:   ||
  Fly   194 DGDVEPEPEPDN---DP 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10904NP_611860.1 MADF 31..125 CDD:214738 30/101 (30%)
CG4004NP_727638.2 MADF_DNA_bdg 14..99 CDD:463144 27/95 (28%)

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