DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10904 and CG5180

DIOPT Version :10

Sequence 1:NP_611860.1 Gene:CG10904 / 37817 FlyBaseID:FBgn0034945 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_650892.2 Gene:CG5180 / 192508 FlyBaseID:FBgn0043457 Length:355 Species:Drosophila melanogaster


Alignment Length:226 Identity:46/226 - (20%)
Similarity:85/226 - (37%) Gaps:62/226 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 WTREKIAKLIELYRSSDCLWNHYSELYKNKDCRAKAIESICASLEITKHD-----YGKKVHNLRN 83
            ::|..:.:.||.|:..:|||......|.|...|.|:.:.:...|:..:.:     ..:|:::||:
  Fly     8 YSRHWLTEFIEQYQEEECLWQPKHNDYSNHTARNKSYDRLVEKLKEVEPNPDRAMVVRKINSLRS 72

  Fly    84 QFNAELKKLERRLEESGGDRDSEKACRWEHFKTLMFLRSVIEPRPGYQQGAPGKKLVSKLDMCYP 148
            .|..|.:|...:     ||    .|.|..::..|:|   :.:.:|  ::...|.|...:|.:.:.
  Fly    73 AFRREFRKTSTK-----GD----YATRLWYYDKLLF---IADHKP--KRHELGSKPKRELHISFD 123

  Fly   149 DQDVEKQSQSSIESLESMIIENDAEI--CQPPKVSEPIPPMPPE--------------------- 190
            |:             |||..|:|:..  .|...:...||..|.:                     
  Fly   124 DE-------------ESMEFEDDSHHTGTQSQHMESIIPTSPDDVEEVAATANNVVVSSQGATLS 175

  Fly   191 -----PAPSSKFV--DPNRTVEAPAAPSPFH 214
                 ||.....|  :.::..||.||.:..|
  Fly   176 TISVTPAECVTLVKSEEHQAAEAAAAAAQAH 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10904NP_611860.1 MADF 31..125 CDD:214738 23/98 (23%)
CG5180NP_650892.2 MADF_DNA_bdg 16..100 CDD:463144 23/95 (24%)

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