DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphas and gnaq

DIOPT Version :10

Sequence 1:NP_477505.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001138271.1 Gene:gnaq / 570108 ZFINID:ZDB-GENE-081104-25 Length:359 Species:Danio rerio


Alignment Length:370 Identity:149/370 - (40%)
Similarity:217/370 - (58%) Gaps:22/370 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEKKQKI 80
            ||::|..:|.:|.|.|||::||:..|...:|||||.|||||||.:|||||:|..|:|:.::|...
Zfish    12 SEEAKEARRINDEIDRQLRRDKKDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSEEDRKGFT 76

  Fly    81 DDIKKNIRDAILTITGAMSTLNPPVALEKKENEPRVEYIQDYASSPDFNYPPEFYEHTEELWKDK 145
            ..:.:||..:..::..||.||.  :..:.:.|:.....:::......|.:...:.:..:.||.|.
Zfish    77 KLVYQNIFTSSQSMIRAMDTLQ--ILYKYEHNKANANIVREVDVEKVFLFVNPYVDAIKSLWNDP 139

  Fly   146 GVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQVDKVNFHMF 210
            |:.:.|:|..||||.|..||:|:.:..|.||:|.|.:||:||.||.|:||.|..|.:..|.|.|.
Zfish   140 GIQECYDRRREYQLSDSTKYYLNSLDRIANPSYIPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMV 204

  Fly   211 DVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRWLRTISI 275
            ||||||.||||||.||.:||:|:|:.|.|.|:.||.|...:||:.||..||::|....|.:..|:
Zfish   205 DVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSV 269

  Fly   276 ILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYFIRDEFLRIS 340
            ||||||:|||.|||..  |.|.:||.|::..|....|               |:.||...|:.::
Zfish   270 ILFLNKKDLLEEKIMF--SHLVDYFPEYDGPQRDAQT---------------AREFILKMFVDLN 317

  Fly   341 TASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLRQYELL 385
            .   |.:...|.|||||.|||||:.||...:|.|.::.|::|.|:
Zfish   318 P---DSEKIIYSHFTCATDTENIRFVFAAVKDTILQLTLKEYNLV 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_477505.1 G-alpha 44..379 CDD:206639 134/334 (40%)
gnaqNP_001138271.1 G-alpha 40..353 CDD:206639 134/334 (40%)

Return to query results.
Submit another query.