DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphas and egl-30

DIOPT Version :10

Sequence 1:NP_477505.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_740789.1 Gene:egl-30 / 171751 WormBaseID:WBGene00001196 Length:355 Species:Caenorhabditis elegans


Alignment Length:374 Identity:157/374 - (41%)
Similarity:225/374 - (60%) Gaps:28/374 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEKKQKI 80
            ||:::.|||.:..|.:|||:||:..|...:|||||.|||||||.:|||||:|..|:|:.:|:..|
 Worm     6 SEEAREQKRINQEIEKQLQRDKRNARRELKLLLLGTGESGKSTFIKQMRIIHGQGYSEEDKRAHI 70

  Fly    81 DDIKKNIRDAILTITGAMSTLNPPVALEKKENEPRVEYIQ--DYASSPDFNYPPEFYEHTEELWK 143
            ..:.:|:..||.::..||.||:.....|.:|.:.:...::  |:.|...|..|  :..:.:|||:
 Worm    71 RLVYQNVFMAIQSMIRAMDTLDIKFGNESEELQEKAAVVREVDFESVTSFEEP--YVSYIKELWE 133

  Fly   144 DKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQVDKVNFH 208
            |.|:.:.|:|..||||.|.|||:|..:..:..|:|.|.||||||.||.|:||.|..|.::::.|.
 Worm   134 DSGIQECYDRRREYQLTDSAKYYLSDLRRLAVPDYLPTEQDILRVRVPTTGIIEYPFDLEQIIFR 198

  Fly   209 MFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRWLRTI 273
            |.||||||.||||||.||.:||:|:|:.|.|.|:.||.|...:||:.||..||::|....|....
 Worm   199 MVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVECDNENRMEESKALFRTIITYPWFTNS 263

  Fly   274 SIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDP--EVIRAKYFIRDEF 336
            |:||||||:|||.|||.  .|.|::||.|:                 |.|  :.|.|:.||...|
 Worm   264 SVILFLNKKDLLEEKIL--YSHLADYFPEY-----------------DGPPRDPIAAREFILKMF 309

  Fly   337 LRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLRQYELL 385
            :.::.   |.....|.|||||.|||||:.||...:|.|.:.:|::|.|:
 Worm   310 VDLNP---DADKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_477505.1 G-alpha 44..379 CDD:206639 142/338 (42%)
egl-30NP_740789.1 G-alpha 34..349 CDD:206639 142/338 (42%)

Return to query results.
Submit another query.