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Protein Alignment DNAlig1 and AT1G49250

DIOPT Version :9

Sequence 1:	NP_611843.2	Gene:	DNAlig1 / 37791	FlyBaseID:	FBgn0262619	Length:	747	Species:	Drosophila melanogaster
Sequence 2:	NP_175351.1	Gene:	AT1G49250 / 841349	AraportID:	AT1G49250	Length:	657	Species:	Arabidopsis thaliana

Alignment Length:	713	Identity:	311/713 - (43%)
Similarity:	437/713 - (61%)	Gaps:	69/713 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    44 SASPETKPKVEPMSVDSEEKTSPVKNVKKEPKEVDDKT----TDKKVTTIGLNSTAATKEDVENY 104
            :||.:.|.|:|             :.|...|..|||||    :|.|
plant     3 NASAKKKRKLE-------------ETVDTPPTRVDDKTLVLISDSK------------------- 35

  Fly   105 DPSADSYHPLKNAYWKDKKVTPYLALARTFQVIEETK-GRLKMIDTLSNFFCSVMLVSPEDLVPS 168
            .|.:|....||:.....||              :.|: ||:.:...|.|...:|:..:|:||:|:
plant    36 KPKSDRVTKLKSKIGLLKK--------------KPTESGRIVITHILCNMLRTVIATTPDDLLPT 86

  Fly   169 VYLSINQLAPAYEGLELGVAE-TTLMKAICKATGRNLAHIKSQTQLTGDLGIVAEQSRVSQRMMF 232
            |||:.|::|||:||::||:.: :.::|||.:|.||..:|::.|....||||:||..||.||.|:|
plant    87 VYLAANEIAPAHEGIKLGMGKGSYIIKAISEAFGRTESHVEQQYTQLGDLGLVANGSRSSQTMIF 151

  Fly   233 QPAPLNVRDVFRKLREIAKLSGQ----SKMDLVYNMFVACRSSEARFFIRSLIGKLRIGIAEQSL 293
            .|.||.|..|...||.|||.||:    .|.||:..:.||....|..:..|.|...||:|.:.|::
plant   152 MPKPLTVVKVADTLRLIAKESGKGSKDKKKDLMKALLVATTDCEPLYLTRLLQDNLRLGFSRQTV 216

  Fly   294 LTALAIGLV-KKNHIDDCKASKVPDVYKDEIVDTTLLLKTAYCQCPNYDIIIPAILKYDIKELQE 357
            |.||....| .:.|      ||.|...|:.:.:...::|..:...|.||||:.|:|...:..|.:
plant   217 LAALGQAAVYNEEH------SKPPPNIKNPLDEAATIVKEVFSMLPVYDIIVGALLTSGVWNLPK 275

  Fly   358 RCPMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGEISIFSRNSENNT 422
            .|.:..|:|:|||||:.|..|..:.|:|.....|.|:|||||||||:..|.|.:.||||::|.||
plant   276 TCNLTLGVPVRPMLAKATTRVDLILEKFKDTVFTAEYKYDGERAQIYYMEDGTVEIFSRHAERNT 340

  Fly   423 AKYPDLIARSTALLKGDVKSYIIDSEIVAWDVERKQILPFQVLSTRKRKNVDIEEIKVQVCVYIF 487
            .||||:....:.|.|..|||:|:|.|:|.::.|:::|||.|  |||..|||::.:|||.|||:.|
plant   341 GKYPDVALVLSRLKKPTVKSFILDCEVVTFNREKEKILPLQ--STRAHKNVNVSDIKVGVCVFAF 403

  Fly   488 DLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLEESIKGNCEGLMVK 552
            |:||:||..|:.:||:.||:.|.:.|:|..|.::|||||.:|||.|:|:||:.||...|||||:|
plant   404 DILYLNGQLLIHENLNIRREKLHDSFEEDLGYFQFATALTSNDIGELQEFLKASIDIGCEGLMIK 468

  Fly   553 TLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACYDTENEEY 617
            :|...||||.||||.|||||||||:.|:|||:|||.|..:.|:|:|||.:|.:||||||.:.||:
plant   469 SLYSNATYEPAKRSNNWLKLKKDYMDNIGDSVDLVPIATFHGRGKRTGFFGAYLLACYDVDKEEF 533

  Fly   618 QSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEPDHWFEPVQVWEVKCADLSLSPIH 682
            ||||||||.|:|.:||..|..|...|.:..|.||:.|..|.||.|.||.:|||||.|||::||::
plant   534 QSICKIGTEFSDVELQDLSSSLCSKVIATPKQYYQVDNDLNPDVWLEPTEVWEVKAADLTVSPVY 598

  Fly   683 RAAIGIVDGERGISLRFPRFIRIRDDKNSENATDANQVAHMYQSQDQVKNNQKSSTQMEMEDE 745
            |.||||||.::||||||||.:|||.|||.|.||.::|:|.|||:|   |:||.|: |.:::|:
plant   599 REAIGIVDPDKGISLRFPRLVRIRKDKNPEEATTSDQIAEMYQAQ---KHNQPSN-QGKVDDD 657

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
DNAlig1	NP_611843.2	PLN03113	1..745	CDD:215584	310/711 (44%)
AT1G49250	NP_175351.1	PLN03113	2..657	CDD:215584	310/711 (44%)

Information from Original Tools:

Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	-	-
eggNOG	1	0.900	-	-
Hieranoid	0	0.000	Not matched by this tool.