Sequence 1: | NP_611843.2 | Gene: | DNAlig1 / 37791 | FlyBaseID: | FBgn0262619 | Length: | 747 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001025345.2 | Gene: | lig3 / 563276 | ZFINID: | ZDB-GENE-030131-8453 | Length: | 1011 | Species: | Danio rerio |
Alignment Length: | 800 | Identity: | 200/800 - (25%) |
---|---|---|---|
Similarity: | 333/800 - (41%) | Gaps: | 150/800 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 ITSFFKKKSDATDSPSPPKKVPKIDAKTELPDE------PHIKSESASPETKPKVE---PMSVDS 60
Fly 61 EEKTSPVKNVKKEPKEVDDKTTDKKVTTIGLNSTAATKEDVENYDPSADSYHPLKNAYWKDKKVT 125
Fly 126 PYLA--LARTFQ----VIEETKGRLKMIDTLSNFFCSVMLVSPEDLVPSVYLSINQLAPAYEGLE 184
Fly 185 LGVAETTLM---KAICKATGRNLAHIKSQTQLTGDLGIVAEQSRVSQ--RMMFQPAP-------- 236
Fly 237 -LNVRDVFRKLREIAKLSGQSKMDL-VYNMFVACRSSEARFFIRSLIGKLRIGIAEQSLLTALAI 299
Fly 300 GLVKKNHIDDCKASKVPDVYKDEIVDTTLLLK--TAYCQCPNYDIIIPAILKYDIKELQERCPMH 362
Fly 363 PGMPLRPMLAQPTKGVHEVFERF-GGMQITCEWKYDGERAQIHRNEKGEISIFSRNSE----NNT 422
Fly 423 AKYPDLIARSTALLKGDVKSYIIDSEIVAWDVERKQILPFQVLSTRKRKNVDIEEIKVQVCVYIF 487
Fly 488 DLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLEESIKGNCEGLMVK 552
Fly 553 TLDEEATYEIAKRSRNWLKLKKDYLSN--VGDSLDLVVIGGYKGKGRRTGTYGGFLLACYDTENE 615
Fly 616 EYQSICKIGTGFTD---EDLQTHSEF--LGKHVT------SAAKSYYR----YDPSLEPDHWFEP 665
Fly 666 VQVWEVKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKNSENATDANQVAHMYQ----- 725
Fly 726 -------SQDQVKNNQKSST 738 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
DNAlig1 | NP_611843.2 | PLN03113 | 1..745 | CDD:215584 | 200/799 (25%) |
DNA_ligase_A_N | 126..292 | CDD:282522 | 37/186 (20%) | ||
Adenylation_DNA_ligase_I_Euk | 358..576 | CDD:185710 | 69/222 (31%) | ||
OBF_DNA_ligase_I | 581..726 | CDD:153438 | 54/171 (32%) | ||
lig3 | NP_001025345.2 | zf-PARP | 95..178 | CDD:279039 | 7/38 (18%) |
DNA_ligase_A_N | 263..428 | CDD:282522 | 35/179 (20%) | ||
dnl1 | 317..829 | CDD:273147 | 163/572 (28%) | ||
Adenylation_DNA_ligase_III | 467..679 | CDD:185712 | 72/241 (30%) | ||
OBF_DNA_ligase_III | 685..823 | CDD:153436 | 52/153 (34%) | ||
LIG3_BRCT | 935..1006 | CDD:293364 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1793 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D274264at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |