Protein Alignment DNAlig1 and Lig3

DIOPT Version :10

• Sequence 1: NP_611843.2
• Gene: DNAlig1 / 37791
• FlyBaseID: FBgn0262619
• Length: 747
• Species: Drosophila melanogaster
• Sequence 2: XP_063125149.1
• Gene: Lig3 / 303369
• RGDID: 1309875
• Length: 1009
• Species: Rattus norvegicus
• Alignment Length: 818
• Identity: 202/818 - (24%)
• Similarity: 344/818 - (42%)
• Gaps: 191/818 - (23%)

  Fly     5 ITSFFKKKSDATDSPSPPKKVPKIDAKTELPD------EPHI----KSESASPETKPKVEPMSVD 59
            |...|:|...|..:....:.:.:::...||.|      ..||    ...:|:|:.|..|:.....
  Rat   148 IKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQHIADLSSKTAATPKKKATVQAKLTT 212

  Fly    60 SEEKTSPVKNVKKEPKEVDDKTTDKKVTTIGLNSTAATKEDVENYDPSADSYHPLKNAYWKDKKV 124
            :.:.|||||..     .....|..:|     .:..:|.|.:....|||:.:.....:|...|.|.
  Rat   213 TGQVTSPVKGA-----SFITSTNPRK-----FSGFSAAKPNNSEQDPSSPAPKTSLSASKCDPKH 267

  Fly   125 TPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSP---------EDLVP----------SVY 170
            ..  .|.|.|:.:                 |:::..:|         .|.:.          .||
  Rat   268 KD--CLLREFRKL-----------------CAMVAENPSYNTKTQIIHDFLQKGSTGDGFRGDVY 313

  Fly   171 LSINQLAPAYEGLELGVAETTLMKAICKATGRNLAHIKSQ------TQLTGDL--GIVAEQSRV- 226
            |::..|.|.            ::|::.....:.:..:.|:      ..:..||  |.|:|..||
  Rat   314 LTVKLLLPG------------VIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVF 366

  Fly   227 -SQRMMFQPAP---LNVRDVFRKLREIAKLSGQ-SKMDLVYNMFVACRSSEARFFIRSLIGKLRI 286
             .|...|.||.   |.:::|...|..::||:.: .:...:.::...|.:::.:..||.:...|::
  Rat   367 FEQSKSFPPAAKSLLTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKM 431

  Fly   287 GIAEQSLLTALAIGLVKKNHIDDCKASKVPDVYKDEIVDTTLLLKTAYCQCPNYDIIIPAILKYD 351
            ....:.:|.||.                 |:.|:            |:....|...::..:| ::
  Rat   432 NSGAKHVLDALD-----------------PNAYE------------AFKASRNLQDVVERVL-HN 466

  Fly   352 IKELQERCPMHPG------------MPLRPMLAQPTKGVHEVFERF-GGMQITCEWKYDGERAQI 403
            .:|:::    .||            .|::||||:..|.:....::. .||  ..|.||||||.|:
  Rat   467 EQEVEK----DPGRRRALSVQASLMTPVQPMLAEACKSIEYAMKKCPNGM--FSEIKYDGERVQV 525

  Fly   404 HRNEKGE-ISIFSRNSE----NNTAKYPDLIARSTALLKGDVKSYIIDSEIVAWDVERKQILPFQ 463
            |:  ||: .|.|||:.:    :..|.:.|.|.::   ..|. :|.|:|||::..|....:.|||.
  Rat   526 HK--KGDHFSYFSRSLKPVLPHKVAHFKDYIPKA---FPGG-QSMILDSEVLLIDNNTGKPLPFG 584

  Fly   464 VLSTRKRKNVDIEEIKVQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDT 528
            .|...|:....    ...||:::||.:|.|..:|:.:.|.||||.|.::..|:.....|:.....
  Rat   585 TLGVHKKAAFQ----DANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIRNRIMFSEMKQV 645

  Fly   529 NDIDEVQQFLEESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSN--VGDSLDLVVIGG 591
            ....::...:...|:...|||::|  |.:.|||..|  |:|||:|||||:.  :.|:.||||:|.
  Rat   646 TKASDLADMINRVIREGLEGLVLK--DVKGTYEPGK--RHWLKVKKDYLNEGAMADTADLVVLGA 706

  Fly   592 YKGKGRRTGTYGGFLLACYDTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPS 656
            :.|:|.:.|....||:.|||.:::::.::.|...|..|..|..    |.|.:.....|   .|||
  Rat   707 FYGQGSKGGMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATLAR----LQKELDMVKIS---KDPS 764

  Fly   657 LEPDHWF---------------EPVQVWEVKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIR 706
            ..|. |.               :...|||:..|:.|.|..|.|        .|||:||||..|||
  Rat   765 KIPS-WLKINKIYYPDFIVPDPKKAAVWEITGAEFSRSEAHTA--------DGISIRFPRCTRIR 820

  Fly   707 DDKNSENATDANQVAHMYQ-SQDQ-----VKNNQKSST 738
            |||:.::||:..|:..:|| |:|:     |..::.|||
  Rat   821 DDKDWKSATNLPQLKELYQLSKDKADFAVVAGDEGSST 858

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
DNAlig1	NP_611843.2	PLN03113	1..745	CDD:215584	202/818 (25%)
Lig3	XP_063125149.1	None