DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: DNAlig1 and Y73B6BL.14

Sequence 1:NP_611843.2 Gene:DNAlig1 FlyBaseID:FBgn0262619 Length:747 Species:Drosophila melanogaster
Sequence 2:NP_500970.2 Gene:Y73B6BL.14 WormBaseID:WBGene00022237 Length:93 Species:Caenorhabditis elegans

Alignment Length:83 Identity:17/84 (20%)
Similarity:29/84 (35%) Gaps:33/84 (39%)


  Fly   244 RKLREIAKLSGQSKMDLVYNMFVACRSSEA----------------------------RFFIRSL 280
            |||.    |.|:||.:..:.:|..|...|:                            ||.||..
 Worm     2 RKLH----LKGKSKFNKFHEIFDICSLLESCPDNRGKTDVISTLLGSDNFDGDLLLWLRFLIRES 62

  Fly   281 IGKLRIGIAEQSLLTALA 298
            ..: :..:|::.|:..|:
 Worm    63 DPR-KYNLADKKLINLLS 79

Known Domains:


GeneSequenceDomainRegion External IDIdentity
DNAlig1NP_611843.2 PLN03113 1..745 CDD:215584 17/84 (20%)
DNA_ligase_A_N 126..292 CDD:282522 15/76 (20%)
Adenylation_DNA_ligase_I_Euk 358..576 CDD:185710
OBF_DNA_ligase_I 581..726 CDD:153438
Y73B6BL.14NP_500970.2 DNA_ligase_A_N 14..>88 CDD:282522 10/68 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG1793
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.