DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNAlig1 and lig1

DIOPT Version :10

Sequence 1:NP_611843.2 Gene:DNAlig1 / 37791 FlyBaseID:FBgn0262619 Length:747 Species:Drosophila melanogaster
Sequence 2:XP_002941929.1 Gene:lig1 / 100271763 XenbaseID:XB-GENE-1009779 Length:1040 Species:Xenopus tropicalis


Alignment Length:787 Identity:412/787 - (52%)
Similarity:538/787 - (68%) Gaps:57/787 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KKKSDATDSPSPPKKVPK---------IDAKTELPDEPHIK--SESASPETKPKVEPMSVDSEEK 63
            |:....:.||:...|.||         :..|.:..|:...|  ||..|.|.|...||     |:|
 Frog   262 KELQPKSTSPNSKPKTPKAKSGKKHSPLQKKVKFSDKVSSKDDSEGKSSEEKSDEEP-----EKK 321

  Fly    64 TSPVKNVKK-----EPKEVDDKT-------TDKKVTTIGLNSTAATK---------------EDV 101
            ..|.|.||:     .||:...||       .:|..:...|.::...|               ||.
 Frog   322 ADPAKPVKQISSFFAPKKPAIKTEKKEEIMNEKNASETSLEASPKPKKTVSSFFGAIKPEPSEDQ 386

  Fly   102 ENYDPSADSYHPLKNAYWKDKKVTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSPEDLV 166
            ..|:||..||||:.:|.|.:.:..||||:||||:.|||...|||.|:|||||..||:.::|.||:
 Frog   387 AVYNPSKSSYHPINDACWSNGQKVPYLAVARTFERIEEESARLKNIETLSNFLRSVIALTPGDLL 451

  Fly   167 PSVYLSINQLAPAYEGLELGVAETTLMKAICKATGRNLAHIKSQTQLTGDLGIVAEQSRVSQRMM 231
            |.:||.:|:|.|||||||||:.||.||||:.:||||.|..|||:.|..||||:|||.||.:||.|
 Frog   452 PCIYLCLNRLGPAYEGLELGIGETILMKAVAQATGRQLEKIKSEAQEKGDLGLVAESSRSNQRTM 516

  Fly   232 FQPAPLNVRDVFRKLREIAKLSGQS----KMDLVYNMFVACRSSEARFFIRSLIGKLRIGIAEQS 292
            |.|..|....||.||::||:::|.:    |:|::..:|||||.||||:..|||.||||||:||||
 Frog   517 FTPPKLMASGVFSKLKDIARMTGNASMNKKIDIIKGLFVACRHSEARYIARSLGGKLRIGLAEQS 581

  Fly   293 LLTAL--AIGLVKKNH-----IDDCKASKVPDVYKDEIVDTTLLLKTAYCQCPNYDIIIPAILKY 350
            :|:|:  |:.|....|     :.|.......|..|..|.|..::||..:|:.||||.|||.:|::
 Frog   582 VLSAIAQAVCLTPPGHDAPPTVMDAGKGMSTDARKSWIEDKAMILKQTFCELPNYDAIIPILLEH 646

  Fly   351 DIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGEISIFS 415
            .|.:|.:.|.:.||:||:||||.||||:.||.:||.....|||:||||||||||..|.||:.|:|
 Frog   647 GIDDLPKHCRLTPGIPLKPMLAHPTKGIGEVLKRFDEAAFTCEYKYDGERAQIHILENGEVHIYS 711

  Fly   416 RNSENNTAKYPDLIARSTALLKGDVKSYIIDSEIVAWDVERKQILPFQVLSTRKRKNVDIEEIKV 480
            ||.||||.||||:|:|...:.|..|||.|:|:|.||||.|:|||.|||||:|||||:||..||||
 Frog   712 RNQENNTTKYPDIISRIPKIKKESVKSCILDTEAVAWDPEKKQIQPFQVLTTRKRKDVDASEIKV 776

  Fly   481 QVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLEESIKGN 545
            |||||.||:||:||.:||.:..::||:||.:.|.|.|||:.|||.:||::.||:.:||::|||.:
 Frog   777 QVCVYAFDMLYLNGESLVKEPFAKRRQLLRDSFLETEGEFMFATYMDTSNTDEISEFLDQSIKDS 841

  Fly   546 CEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACY 610
            |||||||||:::|||||||||.||||||||||..|||:|||||||.|.|||:|||.|||||||.|
 Frog   842 CEGLMVKTLEQDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGKGKRTGIYGGFLLASY 906

  Fly   611 DTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEPDHWFEPVQVWEVKCAD 675
            |.|:||||:|||||||||||||:.|..:|..||..:.:||||:|.:.||||||:|||||||||||
 Frog   907 DEESEEYQTICKIGTGFTDEDLEKHYNYLKDHVIDSPRSYYRWDSATEPDHWFDPVQVWEVKCAD 971

  Fly   676 LSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKNSENATDANQVAHMYQSQDQVKNNQKSSTQM 740
            ||:||:|:||:|:|:.|:|||||||||:||||||..|.||::.|||.:|:.|.|::|   ::|..
 Frog   972 LSISPVHKAALGLVEDEKGISLRFPRFLRIRDDKKPEEATNSFQVADLYRKQQQIQN---TTTTE 1033

  Fly   741 EMEDEFY 747
            :.|::||
 Frog  1034 KGEEDFY 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNAlig1NP_611843.2 PLN03113 1..745 CDD:215584 410/783 (52%)
lig1XP_002941929.1 PTZ00121 <157..>369 CDD:173412 28/111 (25%)
PLN03113 268..1020 CDD:215584 403/756 (53%)

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