Protein Alignment PHDP and Vsx2

DIOPT Version :9

• Sequence 1: NP_523834.1
• Gene: PHDP / 37788
• FlyBaseID: FBgn0025334
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: XP_017449515.1
• Gene: Vsx2 / 171360
• RGDID: 621215
• Length: 380
• Species: Rattus norvegicus
• Alignment Length: 105
• Identity: 52/105 - (49%)
• Similarity: 63/105 - (60%)
• Gaps: 22/105 - (20%)

  Fly   104 LSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 168
            |:.|.|.|:||.||.|||.||.||||.|.|.||||:|.||.:|.|..|.|.|:||||||||||:|
  Rat   140 LNQTKKRKKRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWR 204

  Fly   169 KQE-------------------RHAIYIMKD--KSSKLDG 187
            |:|                   ||:|.:.:.  ||:| ||
  Rat   205 KREKCWGRSSVMAEYGLYGAMVRHSIPLPESILKSAK-DG 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PHDP	NP_523834.1	Homeobox	116..168	CDD:278475	35/51 (69%)
Vsx2	XP_017449515.1	Homeobox	153..205	CDD:395001	34/51 (67%)
		OAR	319..337	CDD:397759

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0494
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810