DRSC/TRiP Functional Genomics Resources

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Protein Alignment: PHDP and Alx4

Sequence 1:NP_523834.1 Gene:PHDP FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_031468.1 Gene:Alx4 MGIID:108359 Length:399 Species:Mus musculus

Alignment Length:159 Identity:63/160 (39%)
Similarity:85/160 (53%) Gaps:39/160 (24%)


  Fly    26 SGANGGGLSVANHINHYNL------------MIDSSYKLCANESAIRGSLNQESSLLFSKITTVS 78
            ||.:...|.|..:....||            .:|:|| |...|:..:|..::.|:.:.|.:.   
Mouse   131 SGGHNAALQVPCYAKESNLGEPELPPDSEPVGMDNSY-LSVKETGAKGPQDRASAEIPSPLE--- 191

  Fly    79 EFYPATHNIGSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTRE 143
                        .||           |.::|.|:||.||||||.||.||||:|.:|||||:|.||
Mouse   192 ------------KTD-----------SESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 233

  Fly   144 EIASKLHLTEARVQVWFQNRRAKFRKQER 172
            ::|.:..||||||||||||||||:||:||
Mouse   234 QLAMRTDLTEARVQVWFQNRRAKWRKRER 262

Known Domains:


GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeobox 116..168 CDD:278475 38/52 (73%)
Alx4NP_031468.1 Homeobox 206..258 CDD:278475 38/52 (73%)
OAR 375..392 CDD:281777
OAR. {ECO:0000255|PROSITE-ProRule:PRU00138} 379..392
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR24329
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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