Protein Alignment CG4882 and mrps27

DIOPT Version :10

• Sequence 1: NP_477377.1
• Gene: CG4882 / 37787
• FlyBaseID: FBgn0025336
• Length: 406
• Species: Drosophila melanogaster
• Sequence 2: NP_001003778.1
• Gene: mrps27 / 445321
• ZFINID: ZDB-GENE-040808-39
• Length: 398
• Species: Danio rerio
• Alignment Length: 328
• Identity: 60/328 - (18%)
• Similarity: 117/328 - (35%)
• Gaps: 118/328 - (35%)

  Fly    84 VKQLLDSTNPQETISVLRNPIQYGLFVDQFSGCFLLDFLLHNGHAVESAQLATILVDRNL---CN 145
            ::|.|......:.:..|:|.:|:|:|.|.|:...|:|               :.:.|::.   |:
Zfish   114 IRQCLKYGARDKALYTLKNKVQFGIFPDDFTFNILID---------------SFIKDKDFKGACS 163

  Fly   146 NELLESLALQSFWSFAKEFKPFESSQVQPPAKNVEVEKVRVKFIRNYPDDASENTEEKKLGRAMV 210
              ::|.:.||         :.||....|     :.......|::...|:.:.:  ||..:|.:::
Zfish   164 --VVEEVMLQ---------ESFEQISTQ-----ILSLHALSKYLATQPELSWQ--EEGSIGASLL 210

  Fly   211 RLGSGEGSLKELKQ------NVALLGYVLTGQV-------------------------------- 237
            ..|        |||      :..|:|..|.|:|
Zfish   211 LAG--------LKQENSIGFSARLMGLALIGKVEFSRGIHAVFHEMPLIWSSGYLRRAVAVLQAV 267

  Fly   238 ----------PEASSFL---------------ASNSAALHKETLLAAQSIVESLKLEGSEELLKS 277
                      .:|.:|:               ..|.:.:|    |..:..:|.|||.......:.
Zfish   268 SSDFTGVQISEDALNFMEKILQDLSAISDGANTQNDSEMH----LDEEDQLERLKLPQYISSFRE 328

  Fly   278 LQEAVEKSSK--SNAIQSLLENSVKANVQKFEPKLLADYGESYQEWAKKFEAAVQRQLDSQSVEE 340
            |:|.::...|  |.:::||||     .:...|...|:.|.:..|:|..:.:..:||:.:|:...:
Zfish   329 LKERLQTQDKIVSRSLESLLE-----LLPISEESDLSAYRQRMQDWGDEQQKLIQREAESREKSK 388

  Fly   341 RKA 343
            |.|
Zfish   389 RDA 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4882	NP_477377.1	MRP-S27	1..351	CDD:462947	60/328 (18%)
mrps27	NP_001003778.1	MRP-S27	1..398	CDD:462947	60/328 (18%)
		PPR repeat	109..136	CDD:276811	4/21 (19%)
		PPR repeat	142..172	CDD:276811	8/55 (15%)