Protein Alignment CG4882 and Mrps27

DIOPT Version :10

• Sequence 1: NP_477377.1
• Gene: CG4882 / 37787
• FlyBaseID: FBgn0025336
• Length: 406
• Species: Drosophila melanogaster
• Sequence 2: NP_001186121.1
• Gene: Mrps27 / 361883
• RGDID: 1311829
• Length: 415
• Species: Rattus norvegicus
• Alignment Length: 323
• Identity: 70/323 - (21%)
• Similarity: 125/323 - (38%)
• Gaps: 76/323 - (23%)

  Fly    84 VKQLLDSTNPQETISVLRNPIQYGLFVDQFSGCFLLDFLL-----------------HNGHAVES 131
            ::|.|....|.:.:..|.|.:|||:|.|.|:...|:|:.:                 .....|.|
  Rat   113 IRQCLKYGAPDKALYTLVNKVQYGIFPDNFTFNLLMDYFIKKENYKDALSVVFEIMKQEAFEVPS 177

  Fly   132 AQLATILVDRNLCNNELLESLALQSFWSFAKEFKPFESSQVQPPAK------------------N 178
            .|..::.|        |...||.::..::.:| :.|.:|.:.|..|                  .
  Rat   178 TQFLSLYV--------LYHCLAEKTDLTWEEE-RDFGASLLLPGLKQRNTVGLSSQLYGYALLGK 233

  Fly   179 VEVE--------KVRVKFIRNYPDDASENTEEKKLGRAMVRLGSGEGSLKELKQNVALLGYVLTG 235
            ||::        .:.:.:...|.|.|.:         .|.|:.|....:|..::.:.:|..||
  Rat   234 VELQCGLRAVYHGMPLIWTPGYLDRALQ---------VMERVASSPEDVKLCREVLDVLDGVL-- 287

  Fly   236 QVPEASSFLASNSAALHKETLLAAQSIVESLKLEGSE-----ELLKSLQEAVEKSSKSNAIQS-- 293
            :|..:....||.:.....|..|.:.::||.|..|..|     :.|:..|.:..|..:.|.::|
  Rat   288 KVVMSPDGQASETQPQEGEDSLGSANLVEQLDTEEPEQSRLPQYLERFQASRSKLQELNRVESES 352

  Fly   294 ---LLENSVKANVQKFEPKLLADYGESYQEWAKKFEAAVQRQLDSQSVEERKATIQKTLSELE 353
               |....||.|:...|.:.||.|.:..:||.::....|||:   |...|:.....::||.:|
  Rat   353 LLTLTTQLVKENLSACEAQDLATYEQKLREWHQERMQLVQRE---QEQREKAKQEYQSLSAVE 412

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4882	NP_477377.1	MRP-S27	1..351	CDD:462947	68/319 (21%)
Mrps27	NP_001186121.1	MRP-S27	1..406	CDD:462947	67/315 (21%)
		PPR repeat	111..135	CDD:276811	5/21 (24%)
		PPR repeat	141..171	CDD:276811	3/29 (10%)