DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG4882 and Mrps27

Sequence 1:NP_001286791.1 Gene:CG4882 FlyBaseID:FBgn0025336 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001186121.1 Gene:Mrps27 RGDID:1311829 Length:415 Species:Rattus norvegicus

Alignment Length:323 Identity:70/324 (22%)
Similarity:125/324 (39%) Gaps:76/324 (23%)


  Fly    84 VKQLLDSTNPQETISVLRNPIQYGLFVDQFSGCFLLDFLL-----------------HNGHAVES 131
            ::|.|....|.:.:..|.|.:|||:|.|.|:...|:|:.:                 .....|.|
  Rat   113 IRQCLKYGAPDKALYTLVNKVQYGIFPDNFTFNLLMDYFIKKENYKDALSVVFEIMKQEAFEVPS 177

  Fly   132 AQLATILVDRNLCNNELLESLALQSFWSFAKEFKPFESSQVQPPAK------------------N 178
            .|..::.|        |...||.::..::.:| :.|.:|.:.|..|                  .
  Rat   178 TQFLSLYV--------LYHCLAEKTDLTWEEE-RDFGASLLLPGLKQRNTVGLSSQLYGYALLGK 233

  Fly   179 VEVE--------KVRVKFIRNYPDDASENTEEKKLGRAMVRLGSGEGSLKELKQNVALLGYVLTG 235
            ||::        .:.:.:...|.|.|.:         .|.|:.|....:|..::.:.:|..||  
  Rat   234 VELQCGLRAVYHGMPLIWTPGYLDRALQ---------VMERVASSPEDVKLCREVLDVLDGVL-- 287

  Fly   236 QVPEASSFLASNSAALHKETLLAAQSIVESLKLEGSE-----ELLKSLQEAVEKSSKSNAIQS-- 293
            :|..:....||.:.....|..|.:.::||.|..|..|     :.|:..|.:..|..:.|.::|  
  Rat   288 KVVMSPDGQASETQPQEGEDSLGSANLVEQLDTEEPEQSRLPQYLERFQASRSKLQELNRVESES 352

  Fly   294 ---LLENSVKANVQKFEPKLLADYGESYQEWAKKFEAAVQRQLDSQSVEERKATIQKTLSELE 353
               |....||.|:...|.:.||.|.:..:||.::....|||:   |...|:.....::||.:|
  Rat   353 LLTLTTQLVKENLSACEAQDLATYEQKLREWHQERMQLVQRE---QEQREKAKQEYQSLSAVE 412

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG4882NP_001286791.1 MRP-S27 1..350 CDD:287055 68/319 (21%)
Mrps27NP_001186121.1 MRP-S27 1..406 CDD:287055 67/316 (21%)
PPR repeat 111..135 CDD:276811 6/22 (27%)
PPR repeat 141..171 CDD:276811 3/30 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C173848543
eggNOG 1 0.900 E1_KOG4570
Hieranoid 1 1.000
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D344346at33208
OrthoFinder 1 1.000 FOG0006366
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 LDO PTHR21393
Phylome 00.000 Not matched by this tool.
TreeFam 1 0.960
76.900

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