DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF6 and Eif6

DIOPT Version :9

Sequence 1:NP_659573.1 Gene:eIF6 / 37776 FlyBaseID:FBgn0034915 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001032429.1 Gene:Eif6 / 305506 RGDID:1305373 Length:245 Species:Rattus norvegicus


Alignment Length:245 Identity:188/245 - (76%)
Similarity:221/245 - (90%) Gaps:0/245 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVHANVGGCRIIGRLTVG 65
            ||:|..||||.::|.|.|||||||||||||||.|||.||.||.||||||||::.|||||||:.||
  Rat     1 MAVRASFENNCEVGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMCVG 65

  Fly    66 NRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEERLSALGNVIACNDYVALVHPDLDKETEEIIA 130
            ||:||||||:|||:||||:||||||:|:|.||||||||||||..|||||||||||||:|||||:|
  Rat    66 NRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILA 130

  Fly   131 DVLKVEVFRQTIADNSLVGSYAVLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAA 195
            |||||||||||:||..|||||.|.|||||:|||||||:||||||||||||||||||||||||:||
  Rat   131 DVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAA 195

  Fly   196 GMVVNDWLSFVGMNTTATEISVIESVFKLNQAQPATVTTKLRAALIEDMS 245
            |||||||.:|.|::||:||:||:|||||||:|:|:|:.|.:|.:||:.::
  Rat   196 GMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDSLT 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF6NP_659573.1 PTZ00136 1..245 CDD:185471 188/243 (77%)
Eif6NP_001032429.1 PTZ00136 1..244 CDD:185471 188/242 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338843
Domainoid 1 1.000 339 1.000 Domainoid score I1070
eggNOG 1 0.900 - - E1_COG1976
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7135
Inparanoid 1 1.050 393 1.000 Inparanoid score I1914
OMA 1 1.010 - - QHG62170
OrthoDB 1 1.010 - - D1157302at2759
OrthoFinder 1 1.000 - - FOG0003965
OrthoInspector 1 1.000 - - oto98451
orthoMCL 1 0.900 - - OOG6_101255
Panther 1 1.100 - - LDO PTHR10784
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2729
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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