DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF6 and tif6

DIOPT Version :9

Sequence 1:NP_659573.1 Gene:eIF6 / 37776 FlyBaseID:FBgn0034915 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_588491.1 Gene:tif6 / 2539126 PomBaseID:SPCC1919.09 Length:244 Species:Schizosaccharomyces pombe


Alignment Length:242 Identity:176/242 - (72%)
Similarity:209/242 - (86%) Gaps:1/242 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALRVQFENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVHANVGGCRIIGRLTVG 65
            ||||.||||:::||||:.|||:|.|||:||||.|||.|||||||.:||||..:||.|||||||.|
pombe     1 MALRAQFENSNEIGVFSNLTNSYALVALGGSENFYSVFEAELGDVVPVVHTTIGGTRIIGRLTCG 65

  Fly    66 NRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEERLSALGNVIACNDYVALVHPDLDKETEEIIA 130
            ||.|||||:||||.|||||||||||.|||.||:||||||||::||||||||||||:::|||||||
pombe    66 NRKGLLVPSSTTDNELQHLRNSLPDPVKIQRVDERLSALGNIVACNDYVALVHPDIERETEEIIA 130

  Fly   131 DVLKVEVFRQTIADNSLVGSYAVLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAA 195
            |||.|||||||:|.|.|.|||..|||||.:|||:||||:||||||||||||||||:||||:|:.|
pombe   131 DVLDVEVFRQTVAGNVLTGSYCALSNQGALVHPRTSIQEQDELSSLLQVPLVAGTINRGSDVIGA 195

  Fly   196 GMVVNDWLSFVGMNTTATEISVIESVFKLNQAQPATVTTKLRAALIE 242
            |:|||||.:|.|::|||||::|.||:|||..|||:.:.:. |..|:|
pombe   196 GLVVNDWCAFAGLDTTATELAVCESIFKLQDAQPSAIISN-RDTLVE 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF6NP_659573.1 PTZ00136 1..245 CDD:185471 176/242 (73%)
tif6NP_588491.1 PTZ00136 1..243 CDD:185471 176/242 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 322 1.000 Domainoid score I227
eggNOG 1 0.900 - - E1_COG1976
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7135
Inparanoid 1 1.050 364 1.000 Inparanoid score I450
OMA 1 1.010 - - QHG62170
OrthoFinder 1 1.000 - - FOG0003965
OrthoInspector 1 1.000 - - oto101959
orthoMCL 1 0.900 - - OOG6_101255
Panther 1 1.100 - - LDO PTHR10784
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R598
SonicParanoid 1 1.000 - - X2729
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.