DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18128 and pnp5b

DIOPT Version :9

Sequence 1:NP_611822.1 Gene:CG18128 / 37756 FlyBaseID:FBgn0034898 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001004628.1 Gene:pnp5b / 447889 ZFINID:ZDB-GENE-040912-54 Length:294 Species:Danio rerio


Alignment Length:262 Identity:98/262 - (37%)
Similarity:149/262 - (56%) Gaps:4/262 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TPQSLF-YPFEEVEAMAKYIVNVSHIRPKYGLICGSFLSDMVSLVEQPVVIPYEDIPNFPDGIEP 102
            ||.|.. |.:||..|.|.:::..:..||..|::|||.|..:..:::..:||.|.||||||.....
Zfish     2 TPDSATGYSYEECTATADWLLKRAPERPLVGIVCGSGLGGLAKMLKDELVINYCDIPNFPQSTVH 66

  Fly   103 DCS--FVLGTVMGAPIIALVHSFHSCDGYNLATCALPVRVMQLCGVRTIMLTSEAAAVDHGFALG 165
            ..:  .|.||:.|.|.:.:...||..:||.:....:|:||.:|.||.|::||:.|..::..|.:|
Zfish    67 GHAGKLVFGTLKGKPCVCMQGRFHLYEGYAIQKTTMPIRVFKLMGVETVILTNAAGGLNQDFKVG 131

  Fly   166 DIMLVQDHINVVGMMHQTPLEGPSDPRFGSRRFSMVNAYDKDLLEKALEIGKRMGIQKFLHSGVL 230
            |||:::||||:.|.....||.|.:|.|||.|...|.:|||:||.:....:...:....|:..||.
Zfish   132 DIMIIKDHINIPGFAGHNPLVGANDDRFGVRFPCMSDAYDRDLQQLVRAVADELDFSVFMRDGVY 196

  Fly   231 ACMGGPILGTVAEERMLRTMEVSAVGMSLVPEVIAAHHGGLKVLAF-VVISRAASDKESEESDKD 294
            :.:|||...|:||.|.||.:...|||||.|.|||.|.|..::|||. ::.::|..|.:||:....
Zfish   197 SVLGGPSFETIAECRALRQLGADAVGMSTVHEVIVARHCDMRVLALSLITNKAVMDYQSEKKANH 261

  Fly   295 KE 296
            :|
Zfish   262 EE 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18128NP_611822.1 PNP_UDP_1 46..280 CDD:294213 89/236 (38%)
XapA 50..280 CDD:223084 87/232 (38%)
pnp5bNP_001004628.1 PRK08202 11..286 CDD:236183 94/253 (37%)
XapA 16..286 CDD:223084 92/248 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58962
OrthoDB 1 1.010 - - D1078969at2759
OrthoFinder 1 1.000 - - FOG0001804
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11904
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1164
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.030

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