DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18128 and pnp4b

DIOPT Version :10

Sequence 1:NP_611822.1 Gene:CG18128 / 37756 FlyBaseID:FBgn0034898 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_991206.1 Gene:pnp4b / 402940 ZFINID:ZDB-GENE-040426-1887 Length:304 Species:Danio rerio


Alignment Length:253 Identity:94/253 - (37%)
Similarity:140/253 - (55%) Gaps:3/253 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FEEVEAMAKYIVNVSHIRPKYGLICGSFLSDMVSLVEQPVVIPYEDIPNFPDGIEP--DCSFVLG 109
            |::.:...:::::.:..|||..::|||.|..:...|.......||||||||....|  :...|.|
Zfish    12 FDDCKLTTEWLLSRTRHRPKIAVVCGSGLGLLADNVPNKQSFRYEDIPNFPVSTVPGHEGCLVFG 76

  Fly   110 TVMGAPIIALVHSFHSCDGYNLATCALPVRVMQLCGVRTIMLTSEAAAVDHGFALGDIMLVQDHI 174
            .:.|...:.:...||..:||:|.....|||:.:|.||.||::|:.:..:...|.:||||:::|||
Zfish    77 QIKGKSCVFMQGRFHLYEGYSLCKVTFPVRIFKLMGVETIIVTNASGGLCQDFKVGDIMVIKDHI 141

  Fly   175 NVVGMMHQTPLEGPSDPRFGSRRFSMVNAYDKDLLEKALEIGKRMGIQKFLHSGVLACMGGPILG 239
            |:.|...|.||.||:|.|||.|...|.:||.|||.:..::|...:|...|:|.||...:.||...
Zfish   142 NLPGFAGQHPLCGPNDERFGIRFPCMSDAYSKDLRKLVMDITAELGYSNFVHEGVYCMVSGPNFE 206

  Fly   240 TVAEERMLRTMEVSAVGMSLVPEVIAAHHGGLKVLAFVVISRAAS-DKESEESDKDKE 296
            |:||.|||..:...:||||.||||..|.|.||:|:...:|:...| |...||....:|
Zfish   207 TIAEARMLHILGSDSVGMSTVPEVTVAKHCGLRVMGLSLITNKVSLDYSREEKVNHEE 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18128NP_611822.1 PNP-EcPNPII_like 48..290 CDD:350160 90/244 (37%)
pnp4bNP_991206.1 PNP-EcPNPII_like 13..284 CDD:350160 93/252 (37%)

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