DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: angel and Lrrc27

Sequence 1:NP_477204.1 Gene:angel FlyBaseID:FBgn0016762 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_081440.1 Gene:Lrrc27 MGIID:1923862 Length:523 Species:Mus musculus

Alignment Length:65 Identity:20/66 (30%)
Similarity:35/66 (53%) Gaps:9/66 (14%)


  Fly    82 LEHLFLYVGIPHEFLSWQRRQQNLLREL----LKLDPDILCLQEMQFDHLPVLVQRLRMGNGKKL 142
            |.||..:..||:  |.....|:|||||:    .:|.|::..| :::::.:.||...:  |:.|.|
Mouse    66 LRHLGKFFKIPN--LQQLHLQRNLLREIPEDFFQLLPNLTWL-DLRYNKIKVLPSGI--GSHKHL 125

  Fly   143  142
            Mouse   126  125

Known Domains:


GeneSequenceDomainRegion External IDIdentity
angelNP_477204.1 EEP 70..351 CDD:294334 20/66 (30%)
Lrrc27NP_081440.1 LRR 1 55..76 4/10 (40%)
leucine-rich repeat 58..77 CDD:275378 5/11 (45%)
LRR_8 76..135 CDD:290566 16/56 (29%)
LRR_4 76..117 CDD:289563 13/44 (30%)
LRR 2 77..98 7/23 (30%)
leucine-rich repeat 78..101 CDD:275378 9/23 (39%)
LRR_4 100..136 CDD:289563 7/30 (23%)
LRR 3 101..122 4/24 (17%)
leucine-rich repeat 102..124 CDD:275378 5/25 (20%)
LRR 4 124..145 1/3 (33%)
leucine-rich repeat 125..147 CDD:275378 1/2 (50%)
LRR 5 147..168
leucine-rich repeat 148..159 CDD:275378
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.