DRSC/TRiP Functional Genomics Resources

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Protein Alignment: angel and cnot6b

Sequence 1:NP_477204.1 Gene:angel FlyBaseID:FBgn0016762 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001103498.1 Gene:cnot6b ZFINID:ZDB-GENE-071004-97 Length:558 Species:Danio rerio

Alignment Length:407 Identity:98/408 (24%)
Similarity:155/408 (38%) Gaps:116/408 (28%)


  Fly    38 KEMESSHDRNRRWTSLGNQAEGRDPHKCSSFKVVSYNILAQDLLLEHLFLYVGIPHEFLSWQRRQ 102
            |.:.:.....|.|..|......|   ..:...|:.||:|........|:.|  .|...|:|..|:
Zfish   162 KRIPTEQPPPRSWIVLQEPERSR---PTALLTVMCYNVLCDKYATRQLYGY--CPSWALNWSYRK 221

  Fly   103 QNLLRELLKLDPDILCLQEMQ----FDHLPVLVQRLRMG-----NGKKLAYVYKKKTGCRTDGCA 158
            :::::|:|..:.||:.|||::    ||..  |::..:.|     :.|..|....:......||||
Zfish   222 KSIMQEILNCNADIISLQEVETEQYFDFF--LLELSKQGYDGFFSPKSRARTMSESDRKHVDGCA 284

  Fly   159 IVYDSSKFELLDHQAVELYDQAV-------ALLNR----DNVALFARFRFKKQ------------ 200
            |.|.:.||.::....||....|:       |:|||    ||:.:......||:            
Zfish   285 IFYKTEKFNVVQKHTVEFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELKKELIEVSSGKSIHP 349

  Fly   201 QEQQKEFVVATTHLLFNTKRSDVRCAQVERILEELQ-------------SFSTDT---PIVLTGD 249
            .|:|. .:||..|:.::.:.|||:..|....|.|::             |.|.:|   |:||..|
Zfish   350 MEKQL-LLVANAHMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLKHSSVSGETSSIPLVLCAD 413

  Fly   250 FNSLPDSSPIEFLVGKNGDVD------------------------STACPEPLH-FEIIDSGEGT 289
            .||||||..:|:|  ..|.||                        ||:.....| |::..:.|..
Zfish   414 LNSLPDSGVVEYL--STGGVDCTHKDFKELRYSDSLTNFNCNGKNSTSNGRITHAFKLKSAYENG 476

  Fly   290 ASTYQNEWV----IVDYILRSLGSRSRHKLLPLSVYSLPSINRCIGAGQI-------------PN 337
            ...|.|...    ::|||.                ||.|.:|.....|.:             |:
Zfish   477 LMPYTNYTFDFRGVIDYIF----------------YSRPQLNVLGVLGPLDTNWLLENNISGCPH 525

  Fly   338 YRLGSDHYALGAVFTVV 354
            ..:.|||::|.|...:|
Zfish   526 PLIPSDHFSLFAQLELV 542

Known Domains:


GeneSequenceDomainRegion External IDIdentity
angelNP_477204.1 EEP 70..351 CDD:294334 92/371 (25%)
cnot6bNP_001103498.1 LRR_8 51..109 CDD:290566
LRR_4 51..91 CDD:289563
leucine-rich repeat 53..75 CDD:275380
LRR_4 75..113 CDD:289563
leucine-rich repeat 76..98 CDD:275380
leucine-rich repeat 99..121 CDD:275380
Deadenylase_CCR4a 191..541 CDD:197340 92/373 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C84183431
eggNOG 1 0.900 E1_COG5239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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