DRSC/TRiP Functional Genomics Resources

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Protein Alignment angel and cnot6l

DIOPT Version :10

Sequence 1:NP_477204.1 Gene:angel / 37748 FlyBaseID:FBgn0016762 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001018474.1 Gene:cnot6l / 553665 ZFINID:ZDB-GENE-050522-302 Length:559 Species:Danio rerio


Alignment Length:374 Identity:93/374 - (24%)
Similarity:146/374 - (39%) Gaps:87/374 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 RRWTSLGNQAEGRDPHKCSS-FKVVSYNILAQDLLLEHLFLYVGIPHEFLSWQRRQQNLLRELLK 111
            |.|.:|    ..||....:: |.|:.||:|........|:.|  .|...|:|:.|::.::.|:..
Zfish   167 RPWITL----RERDQMMPTAVFTVMCYNVLCDKYATRQLYGY--CPSWALNWEYRKKGIMEEITN 225

  Fly   112 LDPDILCLQEMQFDHLPVLVQRLRMGNG-------KKLAYVYKKKTGCRTDGCAIVYDSSKFELL 169
            .|.||:.|||::.:.............|       |..|.:..::.....|||.:.:.:.||.|:
Zfish   226 CDADIISLQEVETEQYYTFFLETLKDRGYDGFFCPKSRAKLVSEQERKHVDGCGVFFKTEKFALV 290

  Fly   170 DHQAVELYDQAVA-------LLNR----DNVALFARFRFK--------KQQEQQKEFVVATTHLL 215
            ....||....|:|       :|||    ||:.:......|        |...:::..:||..|:.
Zfish   291 QKHTVEFNQVAMANSEGSEVMLNRVMTKDNIGVAVLLEVKEDLFAAGLKPPPEKQLLLVANAHMH 355

  Fly   216 FNTKRSDVRCAQVERILEELQSF----------------STDTPIVLTGDFNSLPDSSPIEFLV- 263
            ::.:.|||:..|....|.||:|.                ::..||||..|.||||||..:|:|. 
Zfish   356 WDPEYSDVKLIQTMMFLSELKSIAERASGSINSSSPTSETSSIPIVLCADLNSLPDSGVVEYLSN 420

  Fly   264 -------------------------GKNGDVDSTACPEPLHFEIIDSGEGTASTYQNEWV----I 299
                                     ||||..|.:....   |::..:.||....|.|...    :
Zfish   421 GGVAENHKDFKELRYSDCLTNFSCNGKNGKPDGSITHS---FQLKSAYEGNLMPYTNYTYDFKGV 482

  Fly   300 VDYILRSLGSRSRHKLL-PLSVYSLPSINRCIGAGQIPNYRLGSDHYAL 347
            :|||..|....|...:| ||....|.. |...|.   |:..:.|||::|
Zfish   483 IDYIFFSKTHMSVLGVLGPLETQWLKD-NNITGC---PHPHIPSDHFSL 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
angelNP_477204.1 EEP 70..351 CDD:469791 87/351 (25%)
cnot6lNP_001018474.1 Nuclease domain. /evidence=ECO:0000250 1..550 93/374 (25%)
Required for interaction with cnot1, cnot3 and cnot7. /evidence=ECO:0000250 1..148
LRR <32..>133 CDD:443914
leucine-rich repeat 32..52 CDD:275378
leucine-rich repeat 53..75 CDD:275378
leucine-rich repeat 76..98 CDD:275378
leucine-rich repeat 99..121 CDD:275378
leucine-rich repeat 122..133 CDD:275378
Deadenylase_CCR4b 186..533 CDD:197339 87/351 (25%)
Blue background indicates that the domain is not in the aligned region.

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