DRSC/TRiP Functional Genomics Resources

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Protein Alignment angel and ccr-4

DIOPT Version :10

Sequence 1:NP_477204.1 Gene:angel / 37748 FlyBaseID:FBgn0016762 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001129877.1 Gene:ccr-4 / 178184 WormBaseID:WBGene00000376 Length:677 Species:Caenorhabditis elegans


Alignment Length:387 Identity:93/387 - (24%)
Similarity:160/387 - (41%) Gaps:100/387 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 RRWTSLGNQAEGRDPHK-CSSFKVVSYNILAQDLLLEHLFLYVGIPHEFLSWQRRQQNLLRELLK 111
            |.|..:.:    .||.: .::|.|:.||:|.......:.:.|  .|...|:|:.|:..:::|:..
 Worm   274 RNWVMIRH----ADPERPIATFTVLCYNVLCDKYATVNQYSY--CPSWALNWEYRKGLIIKEIRT 332

  Fly   112 LDPDILCLQEMQFDHLPVLVQRLRMGNGKKLAY--VYKKKTGCRT---------DGCAIVYDSSK 165
            .:.|::.|||::.:....|.|    ...|:|.|  :::.|:..:|         |||||.:...|
 Worm   333 YEADVITLQEVETEQFRTLFQ----PELKQLGYAGIFEAKSRAKTMGEEERKYVDGCAIFWKVDK 393

  Fly   166 FELLDHQ--------AVELYDQAVALLN----RDNVALFARFRFKKQQEQQK------------- 205
            |: :|.|        |::....:..:||    |||:.|.|..:.|:.....|             
 Worm   394 FD-MDKQYLFEFSSVAMKKASTSENMLNRVMPRDNIGLCAVLKIKESVYANKFLGRMQIPMNDNV 457

  Fly   206 ---EFVVATTHLLFNTKRSDVRCAQ-------VERILEEL----QSFSTDTPIVLTGDFNSLPDS 256
               ..||||.|:.::.:..||:..|       |.|:|||:    |......|:::.|||||||||
 Worm   458 VGNPLVVATAHIHWDPEFCDVKLVQSMMLTHEVSRVLEEVSKKYQITQQQVPVLICGDFNSLPDS 522

  Fly   257 SPIEFLVGKNGDV-----------------------DSTACPEPLHFE-IIDSGEGTASTYQNEW 297
            ...|:|  ..|.:                       |......||..: ..|......:.|..::
 Worm   523 GVFEYL--SKGQITRRHMDLKSFRDDSCLEKFTNSTDKNVISHPLRLDSACDINSIPFTNYTLDF 585

  Fly   298 V-IVDYILRSLGSRSRHKLL----PLSVYSLPSINRCIGAGQIPNYRLGSDHYALGAVFTVV 354
            . ::|||..:..|.:|..:|    |..|.|    |:.:|   .|:..:.|||..:.|.:.::
 Worm   586 KGMIDYIFATPQSLARLGILGPFDPQWVQS----NKILG---FPHPHVASDHIPIMAQYAII 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
angelNP_477204.1 EEP 70..351 CDD:469791 88/359 (25%)
ccr-4NP_001129877.1 Deadenylase_CCR4 293..639 CDD:197331 88/361 (24%)

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