DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)efl and AT1G54050

DIOPT Version :10

Sequence 1:NP_523827.1 Gene:l(2)efl / 37744 FlyBaseID:FBgn0011296 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_175807.1 Gene:AT1G54050 / 841843 AraportID:AT1G54050 Length:155 Species:Arabidopsis thaliana


Alignment Length:124 Identity:27/124 - (21%)
Similarity:44/124 - (35%) Gaps:39/124 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PTLVDNGHILWESY--------------AILIYLA-------------EKYALDDSLYPK----- 84
            |..|:.|.|..||:              .:::::|             ||.|.:  .||:     
plant    73 PVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAE--FYPRLRFYH 135

  Fly    85 -DVCERSIVHQRLFFDSGMFQNTTLQAVLSHLRNNPITDEHLAKVKRGVEIVEMYLTDS 142
             ||   :.|..||...:|:.:..|:|......:...:...|.|..... |:.||...||
plant   136 VDV---NAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVN-EVREMIENDS 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)eflNP_523827.1 metazoan_ACD 71..153 CDD:107247 21/91 (23%)
AT1G54050NP_175807.1 ACD_sHsps-like 45..137 CDD:107221 12/65 (18%)

Return to query results.
Submit another query.