DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)efl and Hspb8

DIOPT Version :10

Sequence 1:NP_523827.1 Gene:l(2)efl / 37744 FlyBaseID:FBgn0011296 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_109629.1 Gene:Hspb8 / 80888 MGIID:2135756 Length:196 Species:Mus musculus


Alignment Length:157 Identity:64/157 - (40%)
Similarity:85/157 - (54%) Gaps:20/157 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DFPMRTSRLLDQHFGQGLKRDDL-----------MSSVWNSRPTVLRSGYL---RPWHTNSLQKQ 66
            |.|: :|||||..||.....|||           :||.|   |..||||.:   .|.........
Mouse    23 DSPL-SSRLLDDGFGMDPFPDDLTAPWPEWALPRLSSAW---PGTLRSGMVPRGPPATARFGVPA 83

  Fly    67 ESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRYQLPSD 131
            |..|......|.::|.::|..|.|.|:.||..|.:|.|.|||||||.|.|.||:.|:::.|||::
Mouse    84 EGRSPPPFPGEPWKVCVNVHSFKPEELMVKTKDGYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAE 148

  Fly   132 VNPDTVTSSLSSDGLLTIKAPMKALPP 158
            |:|.||.:|||.:|||.|:||.  :||
Mouse   149 VDPATVFASLSPEGLLIIEAPQ--VPP 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)eflNP_523827.1 metazoan_ACD 71..153 CDD:107247 38/81 (47%)
Hspb8NP_109629.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 2/5 (40%)
ACD_HspB8_like 80..170 CDD:107235 40/89 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..196
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.